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Research: The HUSH complex cooperates with TRIM28 to repress young retrotransposons and new genes
- Luisa Robbez-Masson,
- Christopher H.C. Tie,
- Lucia Conde,
- Hale Tunbak,
- Connor Husovsky,
- Iva A. Tchasovnikarova,
- Richard T. Timms,
- Javier Herrero,
- Paul J. Lehner,
- and Helen M. Rowe
Genome Res. May 4, 2018 ; Published in Advance May 4, 2018, doi:10.1101/gr.228171.117
..., Jakobsson J, Pfaff SL, Trono D. 2013b. TRIM28 repression of retrotransposon-based enhancers is necessary to preserve transcriptional dynamics in embryonic stem cells. Genome Res 23: 452–461. Sadic D, Schmidt K, Groh S, Kondofersky I, Ellwart J, Fuchs C, Theis FJ, Schotta G. 2015. Atrx promotes...
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Research: Interplay of TRIM28 and DNA methylation in controlling human endogenous retroelements
- Priscilla Turelli,
- Nathaly Castro-Diaz,
- Flavia Marzetta,
- Adamandia Kapopoulou,
- Charlène Raclot,
- Julien Duc,
- Vannary Tieng,
- Simon Quenneville,
- and Didier Trono
Genome Res. August 2014 24: 1260-1270; Published in Advance May 30, 2014, doi:10.1101/gr.172833.114
...–529. Rowe HM, Kapopoulou A, Corsinotti A, Fasching L, Macfarlan TS, Tarabay Y, Viville S, Jakobsson J, Pfaff SL, Trono D. 2013b. TRIM28 repression of retrotransposon-based enhancers is necessary to preserve transcriptional dynamics in embryonic stem cells. Genome Res 23: 452–461. Schmidt D, Schwalie PC...
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Research: Loss of transcriptional control over endogenous retroelements during reprogramming to pluripotency
- Marc Friedli,
- Priscilla Turelli,
- Adamandia Kapopoulou,
- Benjamin Rauwel,
- Nathaly Castro-Díaz,
- Helen M. Rowe,
- Gabriela Ecco,
- Carmen Unzu,
- Evarist Planet,
- Angelo Lombardo,
- Bastien Mangeat,
- Barbara E. Wildhaber,
- Luigi Naldini,
- and Didier Trono
Genome Res. August 2014 24: 1251-1259; Published in Advance May 30, 2014, doi:10.1101/gr.172809.114
...-Liesching H, Verp S, Marquis J, et al. 2010. KAP1 controls endogenous retroviruses in embryonic stem cells. Nature 463: 237–240. Rowe HM, Kapopoulou A, Corsinotti A, Fasching L, Macfarlan TS, Tarabay Y, Viville S, Jakobsson J, Pfaff SL, Trono D. 2013. TRIM28 repression of retrotransposon-based enhancers...
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Research: Long terminal repeats power evolution of genes and gene expression programs in mammalian oocytes and zygotes
- Vedran Franke,
- Sravya Ganesh,
- Rosa Karlic,
- Radek Malik,
- Josef Pasulka,
- Filip Horvat,
- Maja Kuzman,
- Helena Fulka,
- Marketa Cernohorska,
- Jana Urbanova,
- Eliska Svobodova,
- Jun Ma,
- Yutaka Suzuki,
- Fugaku Aoki,
- Richard M. Schultz,
- Kristian Vlahovicek,
- and Petr Svoboda
Genome Res. August 2017 27: 1384-1394; Published in Advance May 18, 2017, doi:10.1101/gr.216150.116
...in lackof expression in the zygote. LTRs with zygotic expression, exemplified by MT2, are expressed during ZGA and then become silenced (Kigami et al. 2003; Svoboda et al. 2004). The silencing involves the H3K4 demethylase KDM1A, transcriptional corepressor TRIM28 (also known as KAP1), and H3K9...
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