Searching journal content for articles similar to Robinson-Rechavi et al. 11 (5): 781.

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LETTER: Evolutionary Conservation of Regulatory Elements in Vertebrate Hox Gene Clusters
- Simona Santini,
- Jeffrey L. Boore,
- and Axel Meyer
Genome Res. June 2003 13: 1111-1122; doi:10.1101/gr.700503
..., which encodes a conserved DNA binding structure, the homeodomain (reviewed in Gehring 1993 ). Within the homeobox gene family, Hox genes belong to a subfamily whose members are arranged in genomic clusters. Interestingly, their expression in terms of time of activation and boundary of expression along...
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Letter: Evolution of gene function and regulatory control after whole-genome duplication: Comparative analyses in vertebrates
- Karin S. Kassahn,
- Vinh T. Dang,
- Simon J. Wilkins,
- Andrew C. Perkins,
- and Mark A. Ragan
Genome Res. August 2009 19: 1404-1418; Published in Advance May 13, 2009, doi:10.1101/gr.086827.108
...Evolution of gene function and regulatory control after whole-genome duplication: Comparative analyses in vertebrates Karin S. Kassahn 1 , Vinh T. Dang 1 , Simon J. Wilkins 2 , Andrew C. Perkins 2 and Mark A. Ragan 1 , 3 1...
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ARTICLE: Functional Divergence of Two Zebrafish Midkine Growth Factors Following Fish-Specific Gene Duplication
- Christoph Winkler,
- Matthias Schäfer,
- Jutta Duschl,
- Manfred Schartl,
- and Jean-Nicolas Volff
Genome Res. June 2003 13: 1067-1081; Published in Advance May 12, 2003, doi:10.1101/gr.1097503
...Christoph Schäfer Matthias Jean-Nicolas Volff Schartl Manfred J Duschl Schäfer, M Schartl, M Schartl, Manfred Volff, J Schäfer Schartl Jutta genome;GR-10975R 1088-9051 10.1101/gr.1097503 Functional Divergence of Two Zebrafish Midkine Growth Factors Following Fish-Specific Gene Duplication Functional...
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LETTER: Analyses of the Extent of Shared Synteny and Conserved Gene Orders between the Genome of Fugu rubripes and Human 20q
- Sarah F. Smith,
- Philip Snell,
- Frank Gruetzner,
- Anthony J. Bench,
- Thomas Haaf,
- Judith A. Metcalfe,
- Anthony R. Green,
- and Greg Elgar
Genome Res. May 1, 2002 12: 776-784; Published in Advance April 12, 2002, doi:10.1101/gr.221802
...) Euteleost fish s are characterized by expansion of gene families. Genome Res. 11 : 781 – 788 . ↵ Rodriguez-Tomé P. , Stoehr P.J. , Cameron G.N. , Flores T.P. ( 1996 ) The European Bioinformatics Institute (EBI) databases. Nucleic Acids Res. 24 : 6 – 12 . ↵ Schvarzstein M. , Kirn A. , Haffter P. , Cordes S...
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ARTICLE: Developmental Roles of Pufferfish Hox Clusters and Genome Evolution in Ray-Fin Fish
- Angel Amores,
- Tohru Suzuki,
- Yi-Lin Yan,
- Jordan Pomeroy,
- Amy Singer,
- Chris Amemiya,
- and John H. Postlethwait
Genome Res. January 2004 14: 1-10; doi:10.1101/gr.1717804
...of all vertebrate species by increasing developmental diversification of duplicate genes in daughter lineages. Footnotes [Supplemental material is available online at www.genome.org. The sequence data from this study have been submitted to GenBank under accession nos. AY303229, AY303230, AY...
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Research: TBR1 regulates autism risk genes in the developing neocortex
- James H. Notwell,
- Whitney E. Heavner,
- Siavash Fazel Darbandi,
- Sol Katzman,
- William L. McKenna,
- Christian F. Ortiz-Londono,
- David Tastad,
- Matthew J. Eckler,
- John L.R. Rubenstein,
- Susan K. McConnell,
- Bin Chen,
- and Gill Bejerano
Genome Res. August 2016 26: 1013-1022; Published in Advance June 20, 2016, doi:10.1101/gr.203612.115
...intolerant to LoF mutations, indicating that these genes may play critical roles in normal cortical development. Footnotes [Supplemental material is available for this article.] Article published online before print. Article, supplemental material, and publication date are at http://www.genome...
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LETTER: Bichir HoxA Cluster Sequence Reveals Surprising Trends in Ray-Finned Fish Genomic Evolution
- Chi-hua Chiu,
- Ken Dewar,
- Günter P. Wagner,
- Kazuhiko Takahashi,
- Frank Ruddle,
- Christina Ledje,
- Peter Bartsch,
- Jean-Luc Scemama,
- Edmund Stellwag,
- Claudia Fried,
- Sonja J. Prohaska,
- Peter F. Stadler,
- and Chris T. Amemiya
Genome Res. January 2004 14: 11-17; doi:10.1101/gr.1712904
...teleost fishes such as zebrafish, “euteleosts” sensu ( Nelson 1994 ), contain duplicated genes of several different gene families ( Postlethwait et al. 1998 ; Robinson-Rechavi et al. 2001 ; Taylor et al. 2001 ) and extra Hox clusters ( Amores et al. 1998 ), as compared with their single orthologs...
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LETTER: Pervasive positive selection on duplicated and nonduplicated vertebrate protein coding genes
- Romain A. Studer,
- Simon Penel,
- Laurent Duret,
- and Marc Robinson-Rechavi
Genome Res. September 2008 18: 1393-1402; Published in Advance June 18, 2008, doi:10.1101/gr.076992.108
...: Between 0.9% and 4.7% of sites are affected by positive selection depending on the branches. No functional category was overrepresented among genes under positive selection. Surprisingly, whole genome duplication had no effect on the prevalence of positive selection, whether the fish-specific genome...
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RESOURCE: The LN54 Radiation Hybrid Map of Zebrafish Expressed Sequences
- Neil Hukriede,
- Dan Fisher,
- Jonathan Epstein,
- Lucille Joly,
- Patricia Tellis,
- Yi Zhou,
- Brad Barbazuk,
- Kristine Cox,
- Laura Fenton-Noriega,
- Candace Hersey,
- Jennifer Miles,
- Xiaoming Sheng,
- Anhua Song,
- Rick Waterman,
- Stephen L. Johnson,
- Igor B. Dawid,
- Mario Chevrette,
- Leonard I. Zon,
- John McPherson,
- and Marc Ekker
Genome Res. December 1, 2001 11: 2127-2132; Published in Advance November 12, 2001, doi:10.1101/gr.210601
...a protein involved in attenuation of BMP signaling during development, and human NMA ( Tsang et al. 2000 ). The expansion of gene families in the of the zebrafish and other euteleosts compared with that of mammals ( Robinson-Rechavi et al. 2001a ) has led investigators to suggest the occurrence of a whole...

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