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Research: Comparative epigenomics in distantly related teleost species identifies conserved cis-regulatory nodes active during the vertebrate phylotypic period
- Juan J. Tena,
- Cristina González-Aguilera,
- Ana Fernández-Miñán,
- Javier Vázquez-Marín,
- Helena Parra-Acero,
- Joe W. Cross,
- Peter W.J. Rigby,
- Jaime J. Carvajal,
- Joachim Wittbrodt,
- José L. Gómez-Skarmeta,
- and Juan R. Martínez-Morales
Genome Res. July 2014 24: 1075-1085; Published in Advance April 7, 2014, doi:10.1101/gr.163915.113
...Gómez-Skarmeta Helena Carvajal, J.J Tena, Juan J Tena, JJ JoeW Cross Juan R, Martínez-Morales Wittbrodt Joachim P.W. Rigby Wittbrodt, Joachim genome;gr.163915.113 10.1101/gr.163915.113 1088-9051 Comparative epigenomics in distantly related teleost species identifies conserved cis-regulatory nodes active...
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Resource: Epigenomics of embryogenesis in turbot
- Oscar Aramburu,
- Belen G Pardo,
- Ada Jimenez-Gonzalez,
- Andrés Blanco-Hortas,
- Daniel Macqueen,
- Carmen Bouza,
- and Paulino Martinez
Genome Res. November 4, 2025 gr.280355.124; Published in Advance November 4, 2025, doi:10.1101/gr.280355.124
...accessibility did not 26 affect promoters of differentially expressed genes, suggesting that their 27 accessibility precedes gene transcription changes. Comparative analyses with 28 zebrafish revealed a global transcriptomic correlation of single-copy orthologs at 29 matched stages. While conserved expression...
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Resource: Dynamics of enhancer chromatin signatures mark the transition from pluripotency to cell specification during embryogenesis
- Ozren Bogdanović,
- Ana Fernandez-Miñán,
- Juan J. Tena,
- Elisa de la Calle-Mustienes,
- Carmen Hidalgo,
- Ila van Kruysbergen,
- Simon J. van Heeringen,
- Gert Jan C. Veenstra,
- and José Luis Gómez-Skarmeta
Genome Res. October 2012 22: 2043-2053; Published in Advance May 16, 2012, doi:10.1101/gr.134833.111
...-9051/12; www..org Genome Research 2043 www..org sociated with early zebrafish development and generated a collection of stage-specific enhancer elements that modulate the embryonic transcriptome. In addition to expanding on the prior knowledge derived from cell culture research, this study will contribute...

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