Searching journal content for articles similar to Reed and Palsson 14 (9): 1797.

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  1. Methods: Flux Coupling Analysis of Genome-Scale Metabolic Network Reconstructions
    • Anthony P. Burgard,
    • Evgeni V. Nikolaev,
    • Christophe H. Schilling,
    • and Costas D. Maranas
    Genome Res. February 2004 14: 301-312; Published in Advance January 12, 2004, doi:10.1101/gr.1926504
    ...metabolic networks. The framework is demonstrated on genome-scale metabolic reconstructions of Helicobacter pylori, Escherichia coli , and Saccharomyces cerevisiae . The analysis allows one to determine whether any two metabolic fluxes, v 1 and v 2 , are (1) directionally coupled, if a non...
  2. LETTER: Extreme Pathway Lengths and Reaction Participation in Genome-Scale Metabolic Networks
    • Jason A. Papin,
    • Nathan D. Price,
    • and Bernhard Ø. Palsson
    Genome Res. December 1, 2002 12: 1889-1900; doi:10.1101/gr.327702
    ..., California 92093, USA Abstract Extreme pathways are a unique and minimal set of vectors that completely characterize the steady-state capabilities of genome-scale metabolic networks. A framework is provided to mathematically characterize extreme pathway length and to study how individual reactions...
  3. LETTER: Metabolic functions of duplicate genes in Saccharomyces cerevisiae
    • Lars Kuepfer,
    • Uwe Sauer,
    • and Lars M. Blank
    Genome Res. October 2005 15: 1421-1430; doi:10.1101/gr.3992505
    ...-predicted in silico duplicate knockout phenotypes, genome-scale carbon-flux distributions, singleton mutant phenotypes, and network topology analysis. The results provide no evidence for a particular dominant function that maintains duplicate genes in the genome. In particular, the back-up function...
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