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  1. Research: Dynamic evolution of satellite DNAs drastically differentiates the genomes of Tribolium sibling species
    • Damira Veseljak,
    • Evelin Despot-Slade,
    • Marin Volarić,
    • Lucija Horvat,
    • Tanja Vojvoda Zeljko,
    • Nevenka Meštrović,
    • and Brankica Mravinac
    Genome Res. November 2025 35: 2445-2460; Published in Advance September 16, 2025, doi:10.1101/gr.280516.125
    ...that the centromeric alpha satellite has an intrinsic tendency to form secondary structures, including hairpins, but also that the binding of the CENPB protein to the satellite repeats promotes formation of submicron-sized DNA loops important for centromere stability and its positioning (Chardon et al. 2022...
  2. Method: De novo reconstruction of satellite repeat units from sequence data
    • Yujie Zhang,
    • Justin Chu,
    • Haoyu Cheng,
    • and Heng Li
    Genome Res. November 2023 33: 1994-2001; Published in Advance November 2, 2023, doi:10.1101/gr.278005.123
    ...Open Res 6: 336. doi:10.12688/wellcomeopenres.17493.1 ↵Pertile MD, Graham AN, Choo KHA, Kalitsis P. 2009. Rapid evolution of mouse Y centromere repeat DNA belies recent sequence stability. Genome Res 19: 2202–2213. doi:10.1101/gr.092080.109 Rabanal FA, Gräff M, Lanz C, Fritschi K, Llaca V, Lang M...
  3. Research: Natural genetic variation in yeast longevity
    • Stefan W. Stumpferl,
    • Sue E. Brand,
    • James C. Jiang,
    • Boguslawa Korona,
    • Anurag Tiwari,
    • Jianliang Dai,
    • Jae-Gu Seo,
    • and S. Michal Jazwinski
    Genome Res. October 2012 22: 1963-1973; Published in Advance September 5, 2012, doi:10.1101/gr.136549.111
    .... No significant differences were found (Fig. 5). This suggests that the differences inmRLS are caused by the altered AA of Sir2p. QTL 5 consists mainly of the rDNA locus In addition to QTL 1, other QTLs impact RLS, the most prominent of which is QTL 5. About 97%–99% of QTL 5 consists of tandem repeats of rDNA...
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