Searching journal content for articles similar to Pace et al. 10 (9): 1414.

Displaying results 1-10 of 41

For checked items

view abstracts
download to citation manager

Select this article
Research: Comparative genomics of Cryptosporidium parvum reveals the emergence of an outbreak-associated population in Europe and its spread to the United States
- Greta Bellinzona,
- Tiago Nardi,
- Michele Castelli,
- Gherard Batisti Biffignandi,
- Karim Adjou,
- Martha Betson,
- Yannick Blanchard,
- Ioana Bujila,
- Rachel Chalmers,
- Rebecca Davidson,
- Nicoletta D'Avino,
- Tuulia Enbom,
- Jacinto Gomes,
- Gregory Karadjian,
- Christian Klotz,
- Emma Östlund,
- Judith Plutzer,
- Ruska Rimhanen-Finne,
- Guy Robinson,
- Anna Rosa Sannella,
- Jacek Sroka,
- Christen Rune Stensvold,
- Karin Troell,
- Paolo Vatta,
- Barbora Zalewska,
- Claudio Bandi,
- Davide Sassera,
- and Simone M. Cacciò
Genome Res. June 2024 34: 877-887; Published in Advance July 8, 2024, doi:10.1101/gr.278830.123
.... The candidates include genes encoding for secreted proteins, such as ankyrin repeat-containing proteins, which have been shown in Toxoplasma to be involved in cell invasion (Long et al. 2017), and a RING/Armadillo-type fold domain–containing protein that in Plasmodium falciparum mediates the motility...
OPEN ACCESS ARTICLE
Select this article
Method: Capturing in vivo RNA transcriptional dynamics from the malaria parasite Plasmodium falciparum
- Heather J. Painter,
- Manuela Carrasquilla,
- and Manuel Llinás
Genome Res. June 2017 27: 1074-1086; Published in Advance April 17, 2017, doi:10.1101/gr.217356.116
...; Vembar et al. 2016). Evidence for post-transcriptional regulation in Plasmodium spp. includes several studies that have reported a significant delay 3Present address: Wellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK Corresponding author: manuel@psu.edu Article...
Select this article
Research: Transcriptional variation in the malaria parasite Plasmodium falciparum
- Núria Rovira-Graells,
- Archna P. Gupta,
- Evarist Planet,
- Valerie M. Crowley,
- Sachel Mok,
- Lluís Ribas de Pouplana,
- Peter R. Preiser,
- Zbynek Bozdech,
- and Alfred Cortés
Genome Res. May 2012 22: 925-938; Published in Advance March 13, 2012, doi:10.1101/gr.129692.111
...Malaria genetic variation has been extensively characterized, but the level of epigenetic plasticity remains largely unexplored. Here we provide a comprehensive characterization of transcriptional variation in the most lethal malaria parasite, Plasmodium falciparum, based on highly accurate transcriptional...
Select this article
Letter: Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans
- Andrew P. Jackson,
- John A. Gamble,
- Tim Yeomans,
- Gary P. Moran,
- David Saunders,
- David Harris,
- Martin Aslett,
- Jamie F. Barrell,
- Geraldine Butler,
- Francesco Citiulo,
- David C. Coleman,
- Piet W.J. de Groot,
- Tim J. Goodwin,
- Michael A. Quail,
- Jacqueline McQuillan,
- Carol A. Munro,
- Arnab Pain,
- Russell T. Poulter,
- Marie-Adèle Rajandream,
- Hubert Renauld,
- Martin J. Spiering,
- Adrian Tivey,
- Neil A.R. Gow,
- Barclay Barrell,
- Derek J. Sullivan,
- and Matthew Berriman
Genome Res. December 2009 19: 2231-2244; Published in Advance September 10, 2009, doi:10.1101/gr.097501.109
...to increased virulence in C. albicans. Exceptions to genomic colinearity concern genes with known associations to pathogenesis. While the C. dubliniensis and C. albicans s largely correspond, there are various inversion, insertion–deletion, and transposition events that disrupt the otherwise collinear gene...
Select this article
Research: Complete avian malaria parasite genomes reveal features associated with lineage-specific evolution in birds and mammals
- Ulrike Böhme,
- Thomas D. Otto,
- James A. Cotton,
- Sascha Steinbiss,
- Mandy Sanders,
- Samuel O. Oyola,
- Antoine Nicot,
- Sylvain Gandon,
- Kailash P. Patra,
- Colin Herd,
- Ellen Bushell,
- Katarzyna K. Modrzynska,
- Oliver Billker,
- Joseph M. Vinetz,
- Ana Rivero,
- Chris I. Newbold,
- and Matthew Berriman
Genome Res. April 2018 28: 547-560; Published in Advance March 2, 2018, doi:10.1101/gr.218123.116
...—with their richer metabolism and transport—is easier to evolve than development in enucleated mammalian erythrocytes, it is tempting to speculate that these parasites more closely resemble the ancestral state.In this study, we describe the sequence, annotation, and comparative genomics of Plasmodium relictum SGS1...
OPEN ACCESS ARTICLE
Select this article
Method: GRIDSS: sensitive and specific genomic rearrangement detection using positional de Bruijn graph assembly
- Daniel L. Cameron,
- Jan Schröder,
- Jocelyn Sietsma Penington,
- Hongdo Do,
- Ramyar Molania,
- Alexander Dobrovic,
- Terence P. Speed,
- and Anthony T. Papenfuss
Genome Res. December 2017 27: 2050-2060; Published in Advance November 2, 2017, doi:10.1101/gr.222109.117
...Supplemental Materials for details). Additionally, GRIDSS identified genomic breakpoints associated with a further three of the validated fusion genes.Application to Plasmodium falciparum dataTo test the behavior of GRIDSS on a challenging AT-rich nonmammalian , it was applied to a laboratory strain...
OPEN ACCESS ARTICLE
Select this article
LETTER: High-Throughput Generation of P. falciparum Functional Molecules by Recombinational Cloning
- João Carlos Aguiar,
- Joshua LaBaer,
- Peter L. Blair,
- Victoria Y. Shamailova,
- Malvika Koundinya,
- Joshua A. Russell,
- Fengying Huang,
- Wenhong Mar,
- Robert M. Anthony,
- Adam Witney,
- Sonia R. Caruana,
- Leonardo Brizuela,
- John B. Sacci, Jr.,
- Stephen L. Hoffman,
- and Daniel J. Carucci
Genome Res. October 15, 2004 14: 2076-2082; doi:10.1101/gr.2416604
...of expression clones encoding Plasmodium falciparum single-exon genes. Master clones and their ORFs were transferred en masse to multiple expression vectors. Target genes ( n = 303) were selected using specific sets of criteria, including stage expression and secondary structure. Upon screening four colonies...
Select this article
ARTICLE: Integrated Mapping, Chromosomal Sequencing and Sequence Analysis of Cryptosporidium parvum
- Alan T. Bankier,
- Helen F. Spriggs,
- Berthold Fartmann,
- Bernard A. Konfortov,
- Martin Madera,
- Christine Vogel,
- Sarah A. Teichmann,
- Al Ivens,
- and Paul H. Dear
Genome Res. August 2003 13: 1787-1799; Published in Advance July 17, 2003, doi:10.1101/gr.1555203
...of sequence sampled from the remainder of the genome. To construct a robust physical map, we devised a novel and general strategy, enabling accurate placement of clones regardless of clone artefacts. Analysis reveals a compact genome, unusually rich in membrane proteins. As in Plasmodium falciparum...
Select this article
LETTER: Data-Mining Approaches Reveal Hidden Families of Proteases in the Genome of Malaria Parasite
- Yimin Wu,
- Xiangyun Wang,
- Xia Liu,
- and Yufeng Wang
Genome Res. April 1, 2003 13: 601-616; doi:10.1101/gr.913403
...of Plasmodium falciparum parasites to available drugs. Proteases are attractive antimalarial targets because of their indispensable roles in parasite infection and development, especially in the processes of host erythrocyte rupture/invasion and hemoglobin degradation. However, to date, only a small number...
Select this article
Article: Meiotic recombination generates rich diversity in NK cell receptor genes, alleles, and haplotypes
- Paul J. Norman,
- Laurent Abi-Rached,
- Ketevan Gendzekhadze,
- John A. Hammond,
- Achim K. Moesta,
- Deepti Sharma,
- Thorsten Graef,
- Karina L. McQueen,
- Lisbeth A. Guethlein,
- Christine V.F. Carrington,
- Dasdayanee Chandanayingyong,
- Yih-Hsin Chang,
- Catalina Crespí,
- Güher Saruhan-Direskeneli,
- Kamran Hameed,
- Giorgi Kamkamidze,
- Kwadwo A. Koram,
- Zulay Layrisse,
- Nuria Matamoros,
- Joan Milà,
- Myoung Hee Park,
- Ramasamy M. Pitchappan,
- D. Dan Ramdath,
- Ming-Yuh Shiau,
- Henry A.F. Stephens,
- Siske Struik,
- Dolly Tyan,
- David H. Verity,
- Robert W. Vaughan,
- Ronald W. Davis,
- Patricia A. Fraser,
- Eleanor M. Riley,
- Mostafa Ronaghi,
- and Peter Parham
Genome Res. May 2009 19: 757-769; doi:10.1101/gr.085738.108
....27–1.55 Mya) (Supplemental Fig. S3B), after the three allelic lineages of 3DL1/S1 split. As the Igdomain divergence preceded the genomic deletion event, 3DL1/2v arose at a time potentially close to the emergence of modern humans (;200,000 yr ago) (Relethford 2008). Lastly, our finding that all three variants...

For checked items

view abstracts
download to citation manager

Searching journal content for articles similar to Pace et al. 10 (9): 1414.

Search Results

Modify Results

This search

Preprint Server

Current Issue

In This Issue

Citation format:
Results / page:
Results order: