Searching journal content for articles similar to Newman and Trask 13 (5): 781.

Displaying results 1-10 of 139

For checked items

view abstracts
download to citation manager

Select this article
Research: Hominoid fission of chromosome 14/15 and the role of segmental duplications
- Giuliana Giannuzzi,
- Michele Pazienza,
- John Huddleston,
- Francesca Antonacci,
- Maika Malig,
- Laura Vives,
- Evan E. Eichler,
- and Mario Ventura
Genome Res. November 2013 23: 1763-1773; Published in Advance September 27, 2013, doi:10.1101/gr.156240.113
..., Tesler G, Auvil L, Beever JE, Chowdhary BP, Galibert F, Gatzke L, et al. 2005. Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps. Science 309: 613–617. Niimura Y, Nei M. 2007. Extensive gains and losses of olfactory receptor genes in mammalian evolution. PLoS ONE 2: e...
Select this article
Research: Genomic architecture constrained placental mammal X Chromosome evolution
- Wesley A. Brashear,
- Kevin R. Bredemeyer,
- and William J. Murphy
Genome Res. August 2021 31: 1353-1365; Published in Advance July 22, 2021, doi:10.1101/gr.275274.121
...sequence, and one is immediately adjacent to orthologous sequence that is ampliconic in human (∼135 Mb), although the cat sequence is not ampliconic (Supplemental Table S4). One of these novel genes encodes a putative olfactory receptor (98% similarity to an annotated cheetah gene), and a second shares 91...
Select this article
Resource: The genomic architecture and molecular evolution of ant odorant receptors
- Sean K. McKenzie and
- Daniel J.C. Kronauer
Genome Res. November 2018 28: 1757-1765; Published in Advance September 24, 2018, doi:10.1101/gr.237123.118
...of phenotypic evolution. Nat Rev Genet 14: 645–660. ↵Chess A. 2005. Monoallelic expression of protocadherin genes. Nat Genet 37: 120–121. ↵Clowney EJ, Magklara A, Colquitt BM, Pathak N, Lane RP, Lomvardas S. 2011. High-throughput mapping of the promoters of the mouse olfactory receptor genes reveals a new type...
Select this article
LETTER: Segmental Duplications Flank the Multiple Sclerosis Locus on Chromosome 17q
- Daniel C. Chen,
- Janna Saarela,
- Royden A. Clark,
- Timo Miettinen,
- Anthony Chi,
- Evan E. Eichler,
- Leena Peltonen,
- and Aarno Palotie
Genome Res. August 2004 14: 1483-1492; Published in Advance July 15, 2004, doi:10.1101/gr.2340804
.... Hum. Mol. Genet. 11 : 1987 –1995. ↵ Giglio, S., Broman, K.W., Matsumoto, N., Calvari, V., Gimelli, G., Neumann, T., Ohashi, H., Voullaire, L., Larizza, D., Giorda, R., et al. 2001 . Olfactory receptor-gene clusters, genomic-inversion polymorphisms, and common chromosome rearrangements. Am. J. Hum...
Select this article
LETTER: Segmental duplications and evolutionary plasticity at tumor chromosome break-prone regions
- Eva Darai-Ramqvist,
- Agneta Sandlund,
- Stefan Müller,
- George Klein,
- Stefan Imreh,
- and Maria Kost-Alimova
Genome Res. March 2008 18: 370-379; Published in Advance January 29, 2008, doi:10.1101/gr.7010208
...in inversions during primate evolution; 10 were reused by breaks during mammalian evolution; 14 showed copy number polymorphism in man. TBSD sites showed an increase in satellite repeats, retrotransposed sequences, and other segmental duplications. We propose that the instability of these sites stems from...
Select this article
ARTICLE: Analysis of Segmental Duplications and Genome Assembly in the Mouse
- Jeffrey A. Bailey,
- Deanna M. Church,
- Mario Ventura,
- Mariano Rocchi,
- and Evan E. Eichler
Genome Res. May 2004 14: 789-801; doi:10.1101/gr.2238404
....7%–2.0% of the is predicted to be duplicated by our analyses ( Table 5 ). We assessed protein domain assignments associated with each of these RefSeq genes (Methods). As in human, genes involved in immunity/defense (defensins, serpins, immunoglobulin containing proteins) and growth/development (B56 and hormone receptor...
Select this article
Resource: Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution
- Flavia Angela Maria Maggiolini,
- Ashley D. Sanders,
- Colin James Shew,
- Arvis Sulovari,
- Yafei Mao,
- Marta Puig,
- Claudia Rita Catacchio,
- Maria Dellino,
- Donato Palmisano,
- Ludovica Mercuri,
- Miriana Bitonto,
- David Porubský,
- Mario Cáceres,
- Evan E. Eichler,
- Mario Ventura,
- Megan Y. Dennis,
- Jan O. Korbel,
- and Francesca Antonacci
Genome Res. November 2020 30: 1680-1693; Published in Advance October 22, 2020, doi:10.1101/gr.265322.120
...(Supplemental Table S8); these include genes belonging to several groups, including members involved in the response to bacteria, genes with chemokine receptor binding activity, and golgin family members (Supplemental Table S9). At least five of the inversions that were validated by PCR overlap genes, with two...
Select this article
Research: The evolution of duplicate gene expression in mammalian organs
- Katerina Guschanski,
- Maria Warnefors,
- and Henrik Kaessmann
Genome Res. September 2017 27: 1461-1474; Published in Advance July 25, 2017, doi:10.1101/gr.215566.116
.... Here, we report a large-scale study of the expression evolution of DNA-based functional gene duplicates in three major mammalian lineages (placental mammals, marsupials, egg-laying monotremes) and birds, on the basis of RNA sequencing (RNA-seq) data from nine species and eight organs. We observe...
Select this article
Research: Extreme expansion of the olfactory receptor gene repertoire in African elephants and evolutionary dynamics of orthologous gene groups in 13 placental mammals
- Yoshihito Niimura,
- Atsushi Matsui,
- and Kazushige Touhara
Genome Res. September 2014 24: 1485-1496; Published in Advance July 22, 2014, doi:10.1101/gr.169532.113
...@mail.ecc.u-tokyo.ac.jp Abstract Olfactory receptors (ORs) detect odors in the environment, and OR genes constitute the largest multigene family in mammals. Numbers of OR genes vary greatly among species—reflecting the respective species' lifestyles—and this variation is caused by frequent gene gains and losses during evolution...
Select this article
Research: Pangolin genomes and the evolution of mammalian scales and immunity
- Siew Woh Choo,
- Mike Rayko,
- Tze King Tan,
- Ranjeev Hari,
- Aleksey Komissarov,
- Wei Yee Wee,
- Andrey A. Yurchenko,
- Sergey Kliver,
- Gaik Tamazian,
- Agostinho Antunes,
- Richard K. Wilson,
- Wesley C. Warren,
- Klaus-Peter Koepfli,
- Patrick Minx,
- Ksenia Krasheninnikova,
- Antoinette Kotze,
- Desire L. Dalton,
- Elaine Vermaak,
- Ian C. Paterson,
- Pavel Dobrynin,
- Frankie Thomas Sitam,
- Jeffrine J. Rovie-Ryan,
- Warren E. Johnson,
- Aini Mohamed Yusoff,
- Shu-Jin Luo,
- Kayal Vizi Karuppannan,
- Gang Fang,
- Deyou Zheng,
- Mark B. Gerstein,
- Leonard Lipovich,
- Stephen J. O'Brien,
- and Guat Jah Wong
Genome Res. October 2016 26: 1312-1322; Published in Advance August 10, 2016, doi:10.1101/gr.203521.115
...adaptations was evident from positively selected genes involving immunity-related pathways, inflammation, energy storage and metabolism, muscular and nervous systems, and scale/hair development. Olfactory receptor gene families are significantly expanded in pangolins, reflecting their well-developed olfaction...

For checked items

view abstracts
download to citation manager

Searching journal content for articles similar to Newman and Trask 13 (5): 781.

Search Results

Modify Results

This search

Preprint Server

Current Issue

In This Issue

Citation format:
Results / page:
Results order: