Searching journal content for articles similar to Mortazavi et al. 23 (12): 2136.

Displaying results 1-3 of 3
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  1. Research: The logic of transcriptional regulator recruitment architecture at cis-regulatory modules controlling liver functions
    • Julie Dubois-Chevalier,
    • Vanessa Dubois,
    • Hélène Dehondt,
    • Parisa Mazrooei,
    • Claire Mazuy,
    • Aurélien A. Sérandour,
    • Céline Gheeraert,
    • Penderia Guillaume,
    • Eric Baugé,
    • Bruno Derudas,
    • Nathalie Hennuyer,
    • Réjane Paumelle,
    • Guillemette Marot,
    • Jason S. Carroll,
    • Mathieu Lupien,
    • Bart Staels,
    • Philippe Lefebvre,
    • and Jérôme Eeckhoute
    Genome Res. June 2017 27: 985-996; Published in Advance April 11, 2017, doi:10.1101/gr.217075.116
    ...LD, Epstein CB, Zhang X, Wang L, Issner R, Coyne M, et al. 2011. Mapping and analysis of chromatin state dynamics in nine human cell types. Nature 473: 43–49. Fang B, Everett LJ, Jager J, Briggs E, Armour SM, Feng D, Roy A, GerhartHines Z, Sun Z, Lazar MA. 2014. Circadian enhancers coordinate...
  2. Resource: A genome-wide interactome of DNA-associated proteins in the human liver
    • Ryne C. Ramaker,
    • Daniel Savic,
    • Andrew A. Hardigan,
    • Kimberly Newberry,
    • Gregory M. Cooper,
    • Richard M. Myers,
    • and Sara J. Cooper
    Genome Res. November 2017 27: 1950-1960; Published in Advance October 11, 2017, doi:10.1101/gr.222083.117
    ...). Their integrative analysis found that regulatory marks, particularly enhancerassociated H3K4me1 peaks, exhibited tissue-specific enrichment for relevant complex trait–associated variants. Further, epigenomic features were found to be highly predictive of cancer somaticmutationburdens, and the chromatin landscape...
  3. Method: SLIC-CAGE: high-resolution transcription start site mapping using nanogram-levels of total RNA
    • Nevena Cvetesic,
    • Harry G. Leitch,
    • Malgorzata Borkowska,
    • Ferenc Müller,
    • Piero Carninci,
    • Petra Hajkova,
    • and Boris Lenhard
    Genome Res. December 2018 28: 1943-1956; Published in Advance November 7, 2018, doi:10.1101/gr.235937.118
    ...and quantitative readout of promoter utilization, and their patterns reflect ontogenic, cell-type–specific and cellular homeostasis-associated dynamic profiles which allows promoter classification and informs about the diversity of promoter-level regulation. This has led to increased use of CAGE techniques...
    OPEN ACCESS ARTICLE
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