Searching journal content for articles similar to Milani et al. 19 (1): 1.

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  1. Research: Allele-specific methylation is prevalent and is contributed by CpG-SNPs in the human genome
    • Robert Shoemaker,
    • Jie Deng,
    • Wei Wang,
    • and Kun Zhang
    Genome Res. July 2010 20: 883-889; Published in Advance April 23, 2010, doi:10.1101/gr.104695.109
    ...gene expression patterns in primary leukemic cells reveal regulation of gene expression by CpG site methylation. Genome Res 19: 1–11. Pastinen T, Hudson TJ. 2004. Cis-acting regulatory variation in the human . Science 306: 647–650. Robertson KD. 2005. DNAmethylation and human disease.Nat Rev Genet 6...
  2. Resource: Comprehensive, integrated, and phased whole-genome analysis of the primary ENCODE cell line K562
    • Bo Zhou,
    • Steve S. Ho,
    • Stephanie U. Greer,
    • Xiaowei Zhu,
    • John M. Bell,
    • Joseph G. Arthur,
    • Noah Spies,
    • Xianglong Zhang,
    • Seunggyu Byeon,
    • Reenal Pattni,
    • Noa Ben-Efraim,
    • Michael S. Haney,
    • Rajini R. Haraksingh,
    • Giltae Song,
    • Hanlee P. Ji,
    • Dimitri Perrin,
    • Wing H. Wong,
    • Alexej Abyzov,
    • and Alexander E. Urban
    Genome Res. March 2019 29: 472-484; Published in Advance February 8, 2019, doi:10.1101/gr.234948.118
    ...in 1-Mb windows; indel density in 1-Mb windows; dominant zygosity in 1-Mb windows (heterozygous or homozygous >50%) with regions exhibiting loss of heterozygosity (LOH) indicated; RNA-seq reads for loci exhibiting allele-specific expression; CpG islands (CGI) exhibiting allele-specific methylation...
  3. Research: Tissue type is a major modifier of the 5-hydroxymethylcytosine content of human genes
    • Colm E. Nestor,
    • Raffaele Ottaviano,
    • James Reddington,
    • Duncan Sproul,
    • Diana Reinhardt,
    • Donncha Dunican,
    • Elad Katz,
    • J. Michael Dixon,
    • David J. Harrison,
    • and Richard R. Meehan
    Genome Res. March 2012 22: 467-477; Published in Advance November 21, 2011, doi:10.1101/gr.126417.111
    ...expression (Borgel et al. 2010). The genomic distribution of CpG methylation in the human is highly non-random; whereas the majority of CpGs are methylated, regions of high CpG density, termed CpG islands, which often colocalize with gene promoters, are typically unmethylated. How this dichotomous pattern...
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