Searching journal content for articles similar to Mesner et al. 21 (3): 377.

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  1. Research: Genome-wide mapping of human DNA-replication origins: Levels of transcription at ORC1 sites regulate origin selection and replication timing
    • Gaetano Ivan Dellino,
    • Davide Cittaro,
    • Rossana Piccioni,
    • Lucilla Luzi,
    • Stefania Banfi,
    • Simona Segalla,
    • Matteo Cesaroni,
    • Ramiro Mendoza-Maldonado,
    • Mauro Giacca,
    • and Pier Giuseppe Pelicci
    Genome Res. January 2013 23: 1-11; Published in Advance November 27, 2012, doi:10.1101/gr.142331.112
    ...Genome-wide mapping of human DNA-replication origins: Levels of transcription at ORC1 sites regulate origin selection and replication timing Gaetano Ivan Dellino 1 , 2 , 11 , Davide Cittaro 3 , 6 , Rossana Piccioni 1 , Lucilla Luzi 4...
  2. Research: Bubble-seq analysis of the human genome reveals distinct chromatin-mediated mechanisms for regulating early- and late-firing origins
    • Larry D. Mesner,
    • Veena Valsakumar,
    • Marcin Cieślik,
    • Rebecca Pickin,
    • Joyce L. Hamlin,
    • and Stefan Bekiranov
    Genome Res. November 2013 23: 1774-1788; Published in Advance July 16, 2013, doi:10.1101/gr.155218.113
    ...within the 44 ENCODE pilot regions and to relate their positions to local transcriptional activity as well as to the few chromatin features then available through publicly available databases (Mesner et al. 2011). The results supported amodel inwhichmost origins correspond to zones of clustered...
  3. Research: Orc4 spatiotemporally stabilizes centromeric chromatin
    • Lakshmi Sreekumar,
    • Kiran Kumari,
    • Krishnendu Guin,
    • Asif Bakshi,
    • Neha Varshney,
    • Bhagya C. Thimmappa,
    • Leelavati Narlikar,
    • Ranjith Padinhateeri,
    • Rahul Siddharthan,
    • and Kaustuv Sanyal
    Genome Res. April 2021 31: 607-621; Published in Advance January 29, 2021, doi:10.1101/gr.265900.120
    ...). Centromeres themselves do not harbor an active replication origin (Mitra et al. 2014) but are the earliest replicating regions on each chromosome (Koren et al. 2010). They constitutively cluster toward the nuclear periphery close to the SPBs at a defined space, forming a CENPA-rich zone or CENPA cloud (Sanyal...
  4. Research: Developmental control of gene copy number by repression of replication initiation and fork progression
    • Noa Sher,
    • George W. Bell,
    • Sharon Li,
    • Jared Nordman,
    • Thomas Eng,
    • Matthew L. Eaton,
    • David M. MacAlpine,
    • and Terry L. Orr-Weaver
    Genome Res. January 2012 22: 64-75; Published in Advance November 16, 2011, doi:10.1101/gr.126003.111
    ...the diploid embryo sample, P = 0.012. (C ) Model of replication fork structure at under-replicated region. Genome Research 65 www..org Developmental control of origins and fork movement Transcription is repressed in under-replicated domains Given the positive relationship previously observed between...
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  5. Erratum: Erratum Genome Res. September 2011 21: 1561
    ...genome;21/9/1561 1088-9051 Erratum Erratum Genome Research 21: 377–389 (2011) Bubble-chip analysis of human origin distributions demonstrates on a genomic scale significant clustering into zones and significant association with transcription Larry D. Mesner, Veena Valsakumar, Neerja Karnani...
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