Searching journal content for articles similar to McPherson et al. 22 (11): 2250.

Displaying results 1-3 of 3
For checked items
  1. Method: Identification of complex genomic rearrangements in cancers using CouGaR
    • Misko Dzamba,
    • Arun K. Ramani,
    • Pawel Buczkowicz,
    • Yue Jiang,
    • Man Yu,
    • Cynthia Hawkins,
    • and Michael Brudno
    Genome Res. January 2017 27: 107-117; Published in Advance November 14, 2016, doi:10.1101/gr.211201.116
    ..., respectively. nFuse does not estimate copy count and therefore could not be compared. Overall, this shows that CouGaR generates reliable predictions of genomic rearrangements. Figure 2. Analysis of DIPG29. (A) The predicted CGRs are convolved into a unique structure as visualized by CouGaR-Viz (the four...
  2. Method: INTEGRATE: gene fusion discovery using whole genome and transcriptome data
    • Jin Zhang,
    • Nicole M. White,
    • Heather K. Schmidt,
    • Robert S. Fulton,
    • Chad Tomlinson,
    • Wesley C. Warren,
    • Richard K. Wilson,
    • and Christopher A. Maher
    Genome Res. January 2016 26: 108-118; Published in Advance November 10, 2015, doi:10.1101/gr.186114.114
    ...programming algorithm to assign repetitive reads that minimizes differences of WGS data sets, RNA-seq data sets, and the reference . nFuse (McPherson et al. 2012) is a computational tool intended to identify complex genomic rearrangements from whole- data with the help of transcriptome sequencing data. More...
  3. Research: Fusion, fission, and scrambling of the bilaterian genome in Bryozoa
    • Thomas D. Lewin,
    • Isabel Jiah-Yih Liao,
    • Mu-En Chen,
    • John D.D. Bishop,
    • Peter W.H. Holland,
    • and Yi-Jyun Luo
    Genome Res. January 2025 35: 78-92; Published in Advance January 6, 2025, doi:10.1101/gr.279636.124
    ...-level using Pacific Biosciences (PacBio) HiFi long reads and high-throughput chromosome conformation capture (Hi-C) scaffolding (Wood et al. 2023; Bishop et al. 2023a,b, 2024).View larger version: In this window In a new window Figure 1. Comparative genomics of five chromosome-scale bryozoan s. (A...
    OPEN ACCESS ARTICLE
For checked items

Search Results

New Search

Modify Results

Citation format:
Results / page:
Results order:

This search

  • Alert me when new articles matching this search are published
  • Download all citations on this page to my citation manager

Preprint Server



Current Issue

  1. March 2026, 36 (3)
  1. Current Issue
  1. Alert me to new issues of Genome Research