Searching journal content for articles similar to Mao et al. 33 (8): 1381.

Displaying results 1-3 of 3
For checked items
  1. Resource: Integrative chromatin state annotation of 234 human ENCODE4 cell types using Segway
    • Marjan Farahbod,
    • Aboud Diab,
    • Paul Sud,
    • Meenakshi S. Kagda,
    • Ian Whaling,
    • Mehdi Foroozandeh,
    • Ishan Goel,
    • Habib Daneshpajouh,
    • Benjamin Hitz,
    • J. Michael Cherry,
    • and Maxwell W. Libbrecht
    Genome Res. October 6, 2025 gr.280633.125; Published in Advance October 6, 2025, doi:10.1101/gr.280633.125
    ...-value > 0.1). As there are few experimentally validated genomic elements, it is challenging to precisely measure the accuracy of annotations. Thus, to quantitatively assess these annotations, we evaluated their efficacy towards understanding tissue-specific gene regulation by performing three analyses...
    OPEN ACCESS ARTICLEACCEPTED MANUSCRIPT
  2. Research: Genetic, epigenetic, and environmental mechanisms govern allele-specific gene expression
    • Celine L. St. Pierre,
    • Juan F. Macias-Velasco,
    • Jessica P. Wayhart,
    • Li Yin,
    • Clay F. Semenkovich,
    • and Heather A. Lawson
    Genome Res. June 2022 32: 1042-1057; Published in Advance May 2, 2022, doi:10.1101/gr.276193.121
    ...-by-environment interactions can also alter gene expression patterns in a dynamic and tissue-specific manner without modifying the underlying nucleotide sequence; these effects are missed in a typical sequence-based method. Thus, an allele-specific approach is required to directly measure how cis-regulatory variation impacts...
    OPEN ACCESS ARTICLE
  3. ARTICLE: Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome
    • Timothy Ravasi,
    • Harukazu Suzuki,
    • Ken C. Pang,
    • Shintaro Katayama,
    • Masaaki Furuno,
    • Rie Okunishi,
    • Shiro Fukuda,
    • Kelin Ru,
    • Martin C. Frith,
    • M. Milena Gongora,
    • Sean M. Grimmond,
    • David A. Hume,
    • Yoshihide Hayashizaki,
    • and John S. Mattick
    Genome Res. January 2006 16: 11-19; Published in Advance December 12, 2005, doi:10.1101/gr.4200206
    ...terminal poly(A) tracts but internal priming sites within longer transcripts, only a minority of which is encompassed by known genes. A significant proportion of these transcripts exhibit tissue-specific expression patterns, as well as dynamic changes in their expression in macrophages following...
For checked items

Search Results

New Search

Modify Results

Citation format:
Results / page:
Results order:

This search

  • Alert me when new articles matching this search are published
  • Download all citations on this page to my citation manager

Preprint Server



Current Issue

  1. March 2026, 36 (3)
  1. Current Issue
  1. Alert me to new issues of Genome Research