Searching journal content for articles similar to Luo et al. 21 (7): 1099.

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  1. Method: Comprehensive viral enrichment enables sensitive respiratory virus genomic identification and analysis by next generation sequencing
    • Brigid M. O'Flaherty,
    • Yan Li,
    • Ying Tao,
    • Clinton R. Paden,
    • Krista Queen,
    • Jing Zhang,
    • Darrell L. Dinwiddie,
    • Stephen M. Gross,
    • Gary P. Schroth,
    • and Suxiang Tong
    Genome Res. June 2018 28: 869-877; Published in Advance April 27, 2018, doi:10.1101/gr.226316.117
    ...equally to this work. Corresponding author: sot1@cdc.govAbstractNext generation sequencing (NGS) technologies have revolutionized the genomics field and are becoming more commonplace for identification of human infectious diseases. However, due to the low abundance of viral nucleic acids (NAs) in relation...
  2. Resource: A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples
    • Samia N. Naccache,
    • Scot Federman,
    • Narayanan Veeraraghavan,
    • Matei Zaharia,
    • Deanna Lee,
    • Erik Samayoa,
    • Jerome Bouquet,
    • Alexander L. Greninger,
    • Ka-Cheung Luk,
    • Barryett Enge,
    • Debra A. Wadford,
    • Sharon L. Messenger,
    • Gillian L. Genrich,
    • Kristen Pellegrino,
    • Gilda Grard,
    • Eric Leroy,
    • Bradley S. Schneider,
    • Joseph N. Fair,
    • Miguel A. Martínez,
    • Pavel Isa,
    • John A. Crump,
    • Joseph L. DeRisi,
    • Taylor Sittler,
    • John Hackett, Jr.,
    • Steve Miller,
    • and Charles Y. Chiu
    Genome Res. July 2014 24: 1180-1192; Published in Advance June 4, 2014, doi:10.1101/gr.171934.113
    ...A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples Samia N. Naccache 1 , 2 , Scot Federman 1 , 2 , Narayanan Veeraraghavan 1 , 2 , Matei Zaharia 3 , Deanna...
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  3. Method: Comparison of CAGE and RNA-seq transcriptome profiling using clonally amplified and single-molecule next-generation sequencing
    • Hideya Kawaji,
    • Marina Lizio,
    • Masayoshi Itoh,
    • Mutsumi Kanamori-Katayama,
    • Ai Kaiho,
    • Hiromi Nishiyori-Sueki,
    • Jay W. Shin,
    • Miki Kojima-Ishiyama,
    • Mitsuoki Kawano,
    • Mitsuyoshi Murata,
    • Noriko Ninomiya-Fukuda,
    • Sachi Ishikawa-Kato,
    • Sayaka Nagao-Sato,
    • Shohei Noma,
    • Yoshihide Hayashizaki,
    • Alistair R.R. Forrest,
    • Piero Carninci,
    • and The FANTOM Consortium
    Genome Res. April 2014 24: 708-717; Published in Advance March 27, 2014, doi:10.1101/gr.156232.113
    ...Comparison of CAGE and RNA-seq transcriptome profiling using clonally amplified and single-molecule next-generation sequencing Hideya Kawaji 1 , 2 , 3 , 5 , Marina Lizio 2 , 3 , Masayoshi Itoh 1 , 2 , 3 , Mutsumi Kanamori-Katayama 2...
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  4. Method: Next-generation sequencing identifies the natural killer cell microRNA transcriptome
    • Todd A. Fehniger,
    • Todd Wylie,
    • Elizabeth Germino,
    • Jeffrey W. Leong,
    • Vincent J. Magrini,
    • Sunita Koul,
    • Catherine R. Keppel,
    • Stephanie E. Schneider,
    • Daniel C. Koboldt,
    • Ryan P. Sullivan,
    • Michael E. Heinz,
    • Seth D. Crosby,
    • Rakesh Nagarajan,
    • Giridharan Ramsingh,
    • Daniel C. Link,
    • Timothy J. Ley,
    • and Elaine R. Mardis
    Genome Res. November 2010 20: 1590-1604; Published in Advance October 8, 2010, doi:10.1101/gr.107995.110
    ...Next-generation sequencing identifies the natural killer cell microRNA transcriptome Todd A. Fehniger 1 , 4 , Todd Wylie 2 , 4 , Elizabeth Germino 1 , Jeffrey W. Leong 1 , Vincent J. Magrini 2 , Sunita Koul 3 , Catherine R...
  5. Resource: Copy number variation of individual cattle genomes using next-generation sequencing
    • Derek M. Bickhart,
    • Yali Hou,
    • Steven G. Schroeder,
    • Can Alkan,
    • Maria Francesca Cardone,
    • Lakshmi K. Matukumalli,
    • Jiuzhou Song,
    • Robert D. Schnabel,
    • Mario Ventura,
    • Jeremy F. Taylor,
    • Jose Fernando Garcia,
    • Curtis P. Van Tassell,
    • Tad S. Sonstegard,
    • Evan E. Eichler,
    • and George E. Liu
    Genome Res. April 2012 22: 778-790; Published in Advance February 2, 2012, doi:10.1101/gr.133967.111
    ...Copy number variation of individual cattle genomes using next-generation sequencing Derek M. Bickhart 1 , 8 , Yali Hou 1 , 2 , 8 , Steven G. Schroeder 1 , Can Alkan 3 , 9 , Maria Francesca Cardone 4 , Lakshmi K. Matukumalli 1...
  6. Method: Characterization of complex chromosomal rearrangements by targeted capture and next-generation sequencing
    • Nara L.M. Sobreira,
    • Veena Gnanakkan,
    • Michael Walsh,
    • Beth Marosy,
    • Elizabeth Wohler,
    • George Thomas,
    • Julie E. Hoover-Fong,
    • Ada Hamosh,
    • Sarah J. Wheelan,
    • and David Valle
    Genome Res. October 2011 21: 1720-1727; Published in Advance September 2, 2011, doi:10.1101/gr.122986.111
    ...Characterization of complex chromosomal rearrangements by targeted capture and next-generation sequencing Nara L.M. Sobreira 1 , 2 , Veena Gnanakkan 1 , 2 , Michael Walsh 1 , 3 , Beth Marosy 4 , Elizabeth Wohler 5 , George Thomas...
  7. Methods: Mapping translocation breakpoints by next-generation sequencing
    • Wei Chen,
    • Vera Kalscheuer,
    • Andreas Tzschach,
    • Corinna Menzel,
    • Reinhard Ullmann,
    • Marcel Holger Schulz,
    • Fikret Erdogan,
    • Na Li,
    • Zofia Kijas,
    • Ger Arkesteijn,
    • Isidora Lopez Pajares,
    • Margret Goetz-Sothmann,
    • Uwe Heinrich,
    • Imma Rost,
    • Andreas Dufke,
    • Ute Grasshoff,
    • Birgitta Glaeser,
    • Martin Vingron,
    • and H. Hilger Ropers
    Genome Res. July 2008 18: 1143-1149; Published in Advance March 7, 2008, doi:10.1101/gr.076166.108
    ...Mapping translocation breakpoints by next-generation sequencing Wei Chen 1 , 9 , Vera Kalscheuer 1 , Andreas Tzschach 1 , Corinna Menzel 1 , Reinhard Ullmann 1 , Marcel Holger Schulz 1 , 2 , Fikret Erdogan 1 , Na...
  8. Method: Optimization of de novo transcriptome assembly from next-generation sequencing data
    • Yann Surget-Groba and
    • Juan I. Montoya-Burgos
    Genome Res. October 2010 20: 1432-1440; Published in Advance August 6, 2010, doi:10.1101/gr.103846.109
    ...Optimization of de novo transcriptome assembly from next-generation sequencing data Yann Surget-Groba and Juan I. Montoya-Burgos 1 Department of Zoology and Animal Biology, University of Geneva, 1211 Geneva 4, Switzerland Abstract Transcriptome...
  9. Method: Preparation of high-quality next-generation sequencing libraries from picogram quantities of target DNA
    • Nicholas J. Parkinson,
    • Siarhei Maslau,
    • Ben Ferneyhough,
    • Gang Zhang,
    • Lorna Gregory,
    • David Buck,
    • Jiannis Ragoussis,
    • Chris P. Ponting,
    • and Michael D. Fischer
    Genome Res. January 2012 22: 125-133; Published in Advance November 16, 2011, doi:10.1101/gr.124016.111
    ...Preparation of high-quality next-generation sequencing libraries from picogram quantities of target DNA Nicholas J. Parkinson 1 , 5 , 6 , Siarhei Maslau 1 , 2 , 5 , Ben Ferneyhough 1 , Gang Zhang 1 , Lorna Gregory 3 , David Buck...
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  10. Methods: Rapid whole-genome mutational profiling using next-generation sequencing technologies
    • Douglas R. Smith,
    • Aaron R. Quinlan,
    • Heather E. Peckham,
    • Kathryn Makowsky,
    • Wei Tao,
    • Betty Woolf,
    • Lei Shen,
    • William F. Donahue,
    • Nadeem Tusneem,
    • Michael P. Stromberg,
    • Donald A. Stewart,
    • Lu Zhang,
    • Swati S. Ranade,
    • Jason B. Warner,
    • Clarence C. Lee,
    • Brittney E. Coleman,
    • Zheng Zhang,
    • Stephen F. McLaughlin,
    • Joel A. Malek,
    • Jon M. Sorenson,
    • Alan P. Blanchard,
    • Jarrod Chapman,
    • David Hillman,
    • Feng Chen,
    • Daniel S. Rokhsar,
    • Kevin J. McKernan,
    • Thomas W. Jeffries,
    • Gabor T. Marth,
    • and Paul M. Richardson
    Genome Res. October 2008 18: 1638-1642; Published in Advance September 4, 2008, doi:10.1101/gr.077776.108
    ...Rapid whole-genome mutational profiling using next-generation sequencing technologies Douglas R. Smith 1 , 7 , 9 , Aaron R. Quinlan 2 , 7 , Heather E. Peckham 3 , 7 , Kathryn Makowsky 1 , Wei Tao 1 , Betty Woolf 1 , Lei...
    OPEN ACCESS ARTICLE
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