Searching journal content for articles similar to Liu et al. 26 (4): 499.

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  1. Research: Dynamic A-to-I RNA editing in response to gut microbiome in honeybees
    • Yuange Duan,
    • Min Huang,
    • Lin Ye,
    • Ling Ma,
    • Yashuai Wu,
    • Yating Du,
    • Jiyao Liu,
    • Fan Song,
    • Li Tian,
    • Wanzhi Cai,
    • Hu Li,
    • Xin Zhou,
    • and Shiqi Luo
    Genome Res. March 4, 2026 ; Published in Advance March 4, 2026, doi:10.1101/gr.280291.124
    ...of Plant Protection, China Agricultural University, Beijing 100193, China ADAR-mediated adenosine-to-inosine (A-to-I) mRNA editing contributes to the proteomic diversity and behavioral complexity of animals. Although recent studies indicate that the gut microbiome influences various aspects of animal...
  2. Research: RNA editing in bacteria recodes multiple proteins and regulates an evolutionarily conserved toxin-antitoxin system
    • Dan Bar-Yaacov,
    • Ernest Mordret,
    • Ruth Towers,
    • Tammy Biniashvili,
    • Clara Soyris,
    • Schraga Schwartz,
    • Orna Dahan,
    • and Yitzhak Pilpel
    Genome Res. October 2017 27: 1696-1703; Published in Advance September 1, 2017, doi:10.1101/gr.222760.117
    ...in coding regions, of which only a few lead to nonsynonymous recoding (Ramaswami and Li 2014). All A-toI editing events in mRNA are mediated by enzymes belonging to the ADAR (adenosine deaminase, RNA specific) family that was suggested to constitute a metazoan innovation (Grice and Degnan 2015). In bacteria...
  3. Research: APOBEC3A drives deaminase mutagenesis in human gastric epithelium
    • Yohan An,
    • Ji-Hyun Lee,
    • Joonoh Lim,
    • Jeonghwan Youk,
    • Seongyeol Park,
    • Ji-Hyung Park,
    • Kijong Yi,
    • Taewoo Kim,
    • Chang Hyun Nam,
    • Won Hee Lee,
    • Soo A Oh,
    • Yoo Jin Bae,
    • Thomas M. Klompstra,
    • Haeun Lee,
    • Jinju Han,
    • Junehwak Lee,
    • Jung Woo Park,
    • Jie-Hyun Kim,
    • Hyunki Kim,
    • Hugo Snippert,
    • Bon-Kyoung Koo,
    • and Young Seok Ju
    Genome Res. October 2025 35: 2158-2172; Published in Advance August 26, 2025, doi:10.1101/gr.280338.124
    ...showed increased specificity for contexts other than UpCpN (non-TpCpN in DNA).Further de novo decomposition of RNA editing spectra revealed three RNA editing signatures, referred to as RNA-SBSA, RNA-SBSB, and RNA-SBSC, corresponding to A3A-, A3B- and adenosine deaminase RNA specific (ADAR)-associated A-to-I...
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  4. Method: Locating protein-coding sequences under selection for additional, overlapping functions in 29 mammalian genomes
    • Michael F. Lin,
    • Pouya Kheradpour,
    • Stefan Washietl,
    • Brian J. Parker,
    • Jakob S. Pedersen,
    • and Manolis Kellis
    Genome Res. November 2011 21: 1916-1928; Published in Advance October 12, 2011, doi:10.1101/gr.108753.110
    ...A-to-I recoding sites A-to-I editing is a recodingmechanism in which certain adenosine (A) bases in RNA transcripts are edited to inosine (I), which is read as a guanosine (G) (Bass 2002). This mechanism is essential for normal development of the mammalian nervous system, and, because the enzymes...
    OPEN ACCESS ARTICLE
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