Searching journal content for articles similar to Li et al. 19 (9): 1606.

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  1. Research: Allele-specific methylation is prevalent and is contributed by CpG-SNPs in the human genome
    • Robert Shoemaker,
    • Jie Deng,
    • Wei Wang,
    • and Kun Zhang
    Genome Res. July 2010 20: 883-889; Published in Advance April 23, 2010, doi:10.1101/gr.104695.109
    ...JB, Gao Y, Aach J, Zhang K, Kryukov GV, Xie B, Ahlford A, Yoon JK, Rosenbaum AM, Zaranek AW, et al. 2009b. Multiplex padlock targeted sequencing reveals human hypermutable CpG variations. Genome Res 19: 1606–1615. Li R, Yu C, Li Y, Lam TW, Yiu SM, Kristiansen K, Wang J. 2009c. SOAP2: An improved...
  2. Method: Systematic comparison of three genomic enrichment methods for massively parallel DNA sequencing
    • Jamie K. Teer,
    • Lori L. Bonnycastle,
    • Peter S. Chines,
    • Nancy F. Hansen,
    • Natsuyo Aoyama,
    • Amy J. Swift,
    • Hatice Ozel Abaan,
    • Thomas J. Albert,
    • NISC Comparative Sequencing Program,
    • Elliott H. Margulies,
    • Eric D. Green,
    • Francis S. Collins,
    • James C. Mullikin,
    • and Leslie G. Biesecker
    Genome Res. October 2010 20: 1420-1431; Published in Advance September 1, 2010, doi:10.1101/gr.106716.110
    ...enrichment methods, we have directly compared these methods by evaluating genotype sensitivity and accuracy of variant detection, providing insights about overall performance and relative costs. Results Both of the solution-based methods—MIP (Fig. 1A) and SHS (Fig. 1B)—are highly multiplexed capture methods...
  3. Method: Rapid identification of heterozygous mutations in Drosophila melanogaster using genomic capture sequencing
    • Hui Wang,
    • Abanti Chattopadhyay,
    • Zhe Li,
    • Bryce Daines,
    • Yumei Li,
    • Chunxu Gao,
    • Richard Gibbs,
    • Kun Zhang,
    • and Rui Chen
    Genome Res. July 2010 20: 981-988; Published in Advance May 14, 2010, doi:10.1101/gr.102921.109
    ..., Aach J, Zhang K, Kryukov G, Xie B, Ahlford A, Yoon JK, Rosenbaum AM, Zaranek AW, et al. 2009b. Multiplex padlock capture and sequencing reveal human hypermutable CpG variations. Genome Res 19: 1606–1615. Mardis ER. 2008a. The impact of next-generation sequencing technology on genetics. Trends Genet 24...
  4. Method: A generic, cost-effective, and scalable cell lineage analysis platform
    • Tamir Biezuner,
    • Adam Spiro,
    • Ofir Raz,
    • Shiran Amir,
    • Lilach Milo,
    • Rivka Adar,
    • Noa Chapal-Ilani,
    • Veronika Berman,
    • Yael Fried,
    • Elena Ainbinder,
    • Galit Cohen,
    • Haim M. Barr,
    • Ruth Halaban,
    • and Ehud Shapiro
    Genome Res. November 2016 26: 1588-1599; Published in Advance August 24, 2016, doi:10.1101/gr.202903.115
    ...Fig. S2). The first multiplexed PCR enriches for specific MS genomic loci (known or suspected SNV loci can also be targeted) and attaches a partial Illumina library universal sequence on the flanking regions of the amplicon. Following pooling of all amplicons, the second PCR step relies...
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