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  1. Research: Telomeric repeat evolution in the phylum Nematoda revealed by high-quality genome assemblies and subtelomere structures
    • Jiseon Lim,
    • Wonjoo Kim,
    • Jun Kim,
    • and Junho Lee
    Genome Res. November 2023 33: 1947-1957; Published in Advance November 2, 2023, doi:10.1101/gr.278124.123
    ...). The lengths of the clustered TRMs were comparable to those of the two C. elegans assemblies constructed using long-read sequencing technologies (2.3–5.7 kb) (Kim et al. 2019a; Yoshimura et al. 2019). Furthermore, the telomeric repeats consisted mainly of TTAGAC in LJ2284 (96.67%) and LJ2285 (99...
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  2. Research: Telomerase-independent survival leads to a mosaic of complex subtelomere rearrangements in Chlamydomonas reinhardtii
    • Frédéric Chaux,
    • Nicolas Agier,
    • Clotilde Garrido,
    • Gilles Fischer,
    • Stephan Eberhard,
    • and Zhou Xu
    Genome Res. September 2023 33: 1582-1598; Published in Advance August 14, 2023, doi:10.1101/gr.278043.123
    ...involvement of repeated sequences such as the ones found in subtelomeres (Maciejowski and de Lange 2017; Ho et al. 2020). Only recently were long-read sequencing technologies used to enable the resolution of complex rearrangements at chromosome extremities, in response to telomere shortening and dysfunction...
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  3. Research: Multiple Pristionchus pacificus genomes reveal distinct evolutionary dynamics between de novo candidates and duplicated genes
    • Neel Prabh and
    • Christian Rödelsperger
    Genome Res. July 2022 32: 1315-1327; Published in Advance May 26, 2022, doi:10.1101/gr.276431.121
    .... elegans strains, it was shown that structural variations affect more nucleotides than single-nucleotide polymorphisms and were predicted to change the function of 2694 genes (Kim et al. 2019). In the case of the Pristionchus-specific gene PS312000018427, the gene seems to be completely deleted from...
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