Searching journal content for articles similar to Kawasawa et al. 13 (6b): 1466.

Displaying results 1-6 of 6

For checked items

view abstracts
download to citation manager

Select this article
RESOURCE: Inferring Higher Functional Information for RIKEN Mouse Full-Length cDNA Clones With FACTS
- Takeshi Nagashima,
- Diego G. Silva,
- Nikolai Petrovsky,
- Luis A. Socha,
- Harukazu Suzuki,
- Rintaro Saito,
- Takeya Kasukawa,
- Igor V. Kurochkin,
- Akihiko Konagaya,
- and Christian Schönbach
Genome Res. June 2003 13: 1520-1533; doi:10.1101/gr.1019903
...to prevent massive error propagation when computationally inferred functional information is incorporated into curated databases. In light of these issues, we sought to construct a system that is (1) transcript focused (FANTOM2 clone set), (2) supports large-scale data retrieval, (3) interrelates basic gene...
Select this article
COMMENTARY: A Guide to the Mammalian Genome
- Yasushi Okazaki and
- David A. Hume
Genome Res. June 2003 13: 1267-1272; doi:10.1101/gr.1445603
...Kenzie, L.M., Hill, D.P., Bono, H., RIKEN GER Group and GSL Members, and Yanagisawa, M. 2003 . G-Protein-coupled receptor genes in the FANTOM2 database. Genome Res. (this issue). ↵ Kiyosawa, H., Yamanaka, I., Osato, N., RIKEN GER Group and GSL Members, and Hayashizaki, Y. 2003 . Antisense transcripts...
Select this article
LETTER: Phosphoregulators: Protein Kinases and Protein Phosphatases of Mouse
- Alistair R.R. Forrest,
- Timothy Ravasi,
- Darrin Taylor,
- Thomas Huber,
- David A. Hume,
- RIKEN GER Group,
- GSL Members,
- and Sean Grimmond
Genome Res. June 2003 13: 1443-1454; doi:10.1101/gr.954803
...( Etzold and Argos 1993 ; http://srs.ebi.ac.uk ) to query two public protein databases, SWALL and IPI (International Protein Index). By use of this tool, mouse sequences annotated as containing the kinase and phosphatase InterPro domains detailed in Table 1 were extracted. The RIKEN FANTOM2 group produced...
Select this article
LETTER: Mouse Proteome Analysis
- Alexander Kanapin,
- Serge Batalov,
- Melissa J. Davis,
- Julian Gough,
- Sean Grimmond,
- Hideya Kawaji,
- Michele Magrane,
- Hideo Matsuda,
- Christian Schönbach,
- Rohan D. Teasdale,
- RIKEN GER Group,
- GSL Members,
- and Zheng Yuan3
Genome Res. June 2003 13: 1335-1344; doi:10.1101/gr.978703
...to FANTOM2 data. The number of G-protein coupled receptor (GPCR) proteins was higher for the Celera set, possibly indicating the lacking annotation of pseudogenes, abundant for this class of proteins. At the time of publication, Celera, through the process of expert curation, retired 20% of their gene...
Select this article
LETTER: Analysis of the Mouse Transcriptome for Genes Involved in the Function of the Nervous System
- Stefano Gustincich,
- Serge Batalov,
- Kirk W. Beisel,
- Hidemasa Bono,
- Piero Carninci,
- Colin F. Fletcher,
- Sean Grimmond,
- Nobutaka Hirokawa,
- Erich D. Jarvis,
- Tim Jegla,
- Yuka Kawasawa,
- Julianna LeMieux,
- Harukata Miki,
- Elio Raviola,
- Rohan D. Teasdale,
- Naoko Tominaga,
- Ken Yagi,
- Andreas Zimmer,
- RIKEN GER Group,
- GSL Members,
- Yoshihide Hayashizaki,
- and Yasushi Okazaki
Genome Res. June 2003 13: 1395-1401; doi:10.1101/gr.1135303
...,877 clones were fully sequenced and became part of the FANTOM2 60,770 clones collection and clustered into the RTPS database. We searched the RTPS data set for transcripts that encode the most common receptors and ion channels involved in neurotransmission ( Table 1 ).We identified subunit subtypes...
Select this article
LETTER: Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes
- Kouichi Kimura,
- Ai Wakamatsu,
- Yutaka Suzuki,
- Toshio Ota,
- Tetsuo Nishikawa,
- Riu Yamashita,
- Jun-ichi Yamamoto,
- Mitsuo Sekine,
- Katsuki Tsuritani,
- Hiroyuki Wakaguri,
- Shizuko Ishii,
- Tomoyasu Sugiyama,
- Kaoru Saito,
- Yuko Isono,
- Ryotaro Irie,
- Norihiro Kushida,
- Takahiro Yoneyama,
- Rie Otsuka,
- Katsuhiro Kanda,
- Takahide Yokoi,
- Hiroshi Kondo,
- Masako Wagatsuma,
- Katsuji Murakawa,
- Shinichi Ishida,
- Tadashi Ishibashi,
- Asako Takahashi-Fujii,
- Tomoo Tanase,
- Keiichi Nagai,
- Hisashi Kikuchi,
- Kenta Nakai,
- Takao Isogai,
- and Sumio Sugano
Genome Res. January 2006 16: 55-65; Published in Advance December 12, 2005, doi:10.1101/gr.4039406
...`extracellular' was reduced. For extracellular secretory proteins, there are protein-sorting motifs, called “signal peptides,” at the N terminus. Because of this restriction, the transcriptional regulation could not have freely diverged. It was also intriguing that the G-protein coupled receptors (GPCRs) were...

For checked items

view abstracts
download to citation manager

Searching journal content for articles similar to Kawasawa et al. 13 (6b): 1466.

Search Results

Modify Results

This search

Preprint Server

Current Issue

In This Issue

Citation format:
Results / page:
Results order: