Searching journal content for articles similar to Kashuk et al. 12 (2): 333.

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  1. Resource: GENCODE: The reference human genome annotation for The ENCODE Project
    • Jennifer Harrow,
    • Adam Frankish,
    • Jose M. Gonzalez,
    • Electra Tapanari,
    • Mark Diekhans,
    • Felix Kokocinski,
    • Bronwen L. Aken,
    • Daniel Barrell,
    • Amonida Zadissa,
    • Stephen Searle,
    • If Barnes,
    • Alexandra Bignell,
    • Veronika Boychenko,
    • Toby Hunt,
    • Mike Kay,
    • Gaurab Mukherjee,
    • Jeena Rajan,
    • Gloria Despacio-Reyes,
    • Gary Saunders,
    • Charles Steward,
    • Rachel Harte,
    • Michael Lin,
    • Cédric Howald,
    • Andrea Tanzer,
    • Thomas Derrien,
    • Jacqueline Chrast,
    • Nathalie Walters,
    • Suganthi Balasubramanian,
    • Baikang Pei,
    • Michael Tress,
    • Jose Manuel Rodriguez,
    • Iakes Ezkurdia,
    • Jeltje van Baren,
    • Michael Brent,
    • David Haussler,
    • Manolis Kellis,
    • Alfonso Valencia,
    • Alexandre Reymond,
    • Mark Gerstein,
    • Roderic Guigó,
    • and Tim J. Hubbard
    Genome Res. September 2012 22: 1760-1774; doi:10.1101/gr.135350.111
    ...RNAs and pseudogenes (e.g., PTENP1). AceViewpredicts 31,057 single exon loci compared with 1724 in GENCODE, 3234 in RefSeq, and 4731 in UCSC genes. Excluding single exon loci predicted by AceView from this analysis, the number of AceView gene loci is much closer to the number in other gene sets (Fig. 7A). The GENCODE...
    OPEN ACCESS ARTICLE
  2. METHODS: High-Throughput Variation Detection and Genotyping Using Microarrays
    • David J. Cutler,
    • Michael E. Zwick,
    • Minerva M. Carrasquillo,
    • Christopher T. Yohn,
    • Katherine P. Tobin,
    • Carl Kashuk,
    • Debra J. Mathews,
    • Nila A. Shah,
    • Evan E. Eichler,
    • Janet A. Warrington,
    • and Aravinda Chakravarti
    Genome Res. November 1, 2001 11: 1913-1925; Published in Advance October 15, 2001, doi:10.1101/gr.197201
    ...% of the samples could be called at a particular site. Characterizing Unreliable Genotype Calls Approximately 80% of all genotypes can be called with extremely high confidence. Of course, one would like to understand why 20% of the genotype calls are of lower quality. To help visualize the pattern of failure...
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