Searching journal content for articles similar to Karafet et al. 18 (5): 830.

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  1. Resource: A calibrated human Y-chromosomal phylogeny based on resequencing
    • Wei Wei,
    • Qasim Ayub,
    • Yuan Chen,
    • Shane McCarthy,
    • Yiping Hou,
    • Ignazio Carbone,
    • Yali Xue,
    • and Chris Tyler-Smith
    Genome Res. February 2013 23: 388-395; Published in Advance October 4, 2012, doi:10.1101/gr.143198.112
    ...J Phys Anthropol 146: 553–559. Karafet TM,Mendez FL,MeilermanMB,Underhill PA, Zegura SL,HammerMF. 2008. New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree.Genome Res 18: 830–838. Li H, Ruan J, Durbin R. 2008. Mapping short DNA sequencing reads...
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  2. Research: The initial peopling of the Americas: A growing number of founding mitochondrial genomes from Beringia
    • Ugo A. Perego,
    • Norman Angerhofer,
    • Maria Pala,
    • Anna Olivieri,
    • Hovirag Lancioni,
    • Baharak Hooshiar Kashani,
    • Valeria Carossa,
    • Jayne E. Ekins,
    • Alberto Gómez-Carballa,
    • Gabriela Huber,
    • Bettina Zimmermann,
    • Daniel Corach,
    • Nora Babudri,
    • Fausto Panara,
    • Natalie M. Myres,
    • Walther Parson,
    • Ornella Semino,
    • Antonio Salas,
    • Scott R. Woodward,
    • Alessandro Achilli,
    • and Antonio Torroni
    Genome Res. September 2010 20: 1174-1179; Published in Advance June 29, 2010, doi:10.1101/gr.109231.110
    ...PA, Zegura SL, Hammer MF. 2008. New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree. Genome Res 18: 830– 838. Kaufman T, Golla V. 2000. Language groupings in the New World: Their reliability and usability in cross-disciplinary studies. In America past...
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  3. Resource: An unbiased resource of novel SNP markers provides a new chronology for the human Y chromosome and reveals a deep phylogenetic structure in Africa
    • Rosaria Scozzari,
    • Andrea Massaia,
    • Beniamino Trombetta,
    • Giovanna Bellusci,
    • Natalie M. Myres,
    • Andrea Novelletto,
    • and Fulvio Cruciani
    Genome Res. March 2014 24: 535-544; Published in Advance January 6, 2014, doi:10.1101/gr.160788.113
    ..., the MSY tree has suffered from a lower level of resolution than that of the mtDNA phylogeny. However, with the advent of new technologies now allowing for high-throughput identification of Y chromosome SNSs, these markers can now be used to characterize the MSY tree at a greater level of resolution...
  4. Research: A recent bottleneck of Y chromosome diversity coincides with a global change in culture
    • Monika Karmin,
    • Lauri Saag,
    • Mário Vicente,
    • Melissa A. Wilson Sayres,
    • Mari Järve,
    • Ulvi Gerst Talas,
    • Siiri Rootsi,
    • Anne-Mai Ilumäe,
    • Reedik Mägi,
    • Mario Mitt,
    • Luca Pagani,
    • Tarmo Puurand,
    • Zuzana Faltyskova,
    • Florian Clemente,
    • Alexia Cardona,
    • Ene Metspalu,
    • Hovhannes Sahakyan,
    • Bayazit Yunusbayev,
    • Georgi Hudjashov,
    • Michael DeGiorgio,
    • Eva-Liis Loogväli,
    • Christina Eichstaedt,
    • Mikk Eelmets,
    • Gyaneshwer Chaubey,
    • Kristiina Tambets,
    • Sergei Litvinov,
    • Maru Mormina,
    • Yali Xue,
    • Qasim Ayub,
    • Grigor Zoraqi,
    • Thorfinn Sand Korneliussen,
    • Farida Akhatova,
    • Joseph Lachance,
    • Sarah Tishkoff,
    • Kuvat Momynaliev,
    • François-Xavier Ricaut,
    • Pradiptajati Kusuma,
    • Harilanto Razafindrazaka,
    • Denis Pierron,
    • Murray P. Cox,
    • Gazi Nurun Nahar Sultana,
    • Rane Willerslev,
    • Craig Muller,
    • Michael Westaway,
    • David Lambert,
    • Vedrana Skaro,
    • Lejla Kovačevic´,
    • Shahlo Turdikulova,
    • Dilbar Dalimova,
    • Rita Khusainova,
    • Natalya Trofimova,
    • Vita Akhmetova,
    • Irina Khidiyatova,
    • Daria V. Lichman,
    • Jainagul Isakova,
    • Elvira Pocheshkhova,
    • Zhaxylyk Sabitov,
    • Nikolay A. Barashkov,
    • Pagbajabyn Nymadawa,
    • Evelin Mihailov,
    • Joseph Wee Tien Seng,
    • Irina Evseeva,
    • Andrea Bamberg Migliano,
    • Syafiq Abdullah,
    • George Andriadze,
    • Dragan Primorac,
    • Lubov Atramentova,
    • Olga Utevska,
    • Levon Yepiskoposyan,
    • Damir Marjanovic´,
    • Alena Kushniarevich,
    • Doron M. Behar,
    • Christian Gilissen,
    • Lisenka Vissers,
    • Joris A. Veltman,
    • Elena Balanovska,
    • Miroslava Derenko,
    • Boris Malyarchuk,
    • Andres Metspalu,
    • Sardana Fedorova,
    • Anders Eriksson,
    • Andrea Manica,
    • Fernando L. Mendez,
    • Tatiana M. Karafet,
    • Krishna R. Veeramah,
    • Neil Bradman,
    • Michael F. Hammer,
    • Ludmila P. Osipova,
    • Oleg Balanovsky,
    • Elza K. Khusnutdinova,
    • Knut Johnsen,
    • Maido Remm,
    • Mark G. Thomas,
    • Chris Tyler-Smith,
    • Peter A. Underhill,
    • Eske Willerslev,
    • Rasmus Nielsen,
    • Mait Metspalu,
    • Richard Villems,
    • and Toomas Kivisild
    Genome Res. April 2015 25: 459-466; Published in Advance March 13, 2015, doi:10.1101/gr.186684.114
    ...that substantially increase the resolution of the internal branches of the Chr Y tree, we try to both incorporate the new information and to maintain the integrity and historical coherence of the initial YCC haplogroup nomenclature as introduced in 2002 and its updates (Jobling and Tyler-Smith 2003; Karafet et al...
  5. Research: Recurrence, submicroscopic complexity, and potential clinical relevance of copy gains detected by array CGH that are shown to be unbalanced insertions by FISH
    • Nicholas J. Neill,
    • Blake C. Ballif,
    • Allen N. Lamb,
    • Sumit Parikh,
    • J. Britt Ravnan,
    • Roger A. Schultz,
    • Beth S. Torchia,
    • Jill A. Rosenfeld,
    • and Lisa G. Shaffer
    Genome Res. April 2011 21: 535-544; Published in Advance March 7, 2011, doi:10.1101/gr.114579.110
    ...-comparative genomic hybridization (aCGH) results. Am J Med Genet A 152A: 1111–1126. Karafet TM, Mendez FL, Meilerman MB, Underhill PA, Zegura SL, Hammer MF. 2008. New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree. Genome Res 18: 830– 838. Insertions detected by array...
  6. LETTER: Ethnic India: A Genomic View, With Special Reference to Peopling and Structure
    • Analabha Basu,
    • Namita Mukherjee,
    • Sangita Roy,
    • Sanghamitra Sengupta,
    • Sanat Banerjee,
    • Madan Chakraborty,
    • Badal Dey,
    • Monami Roy,
    • Bidyut Roy,
    • Nitai P. Bhattacharyya,
    • Susanta Roychoudhury,
    • and Partha P. Majumder
    Genome Res. October 2003 13: 2277-2290; doi:10.1101/gr.1413403
    ...), pp. 53 -79. Popular Prakashan, Bombay, India. ↵ Misra, V.N. 1992 . Stone age in India: An ecological perspective. Man and Env. 14 : 17 -64. ↵ Mukherjee, N., Nebel, A., Oppenheim, A., and Majumder, P.P. 2001 . High-resolution analysis of Y-chromosomal polymorphisms reveals signatures of population...
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