Searching journal content for articles similar to Ji et al. 10 (3): 319.

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  1. LETTER: Human Paralogs of KIAA0187 Were Created through Independent Pericentromeric-Directed and Chromosome-Specific Duplication Mechanisms
    • Moira Crosier,
    • Luigi Viggiano,
    • Jane Guy,
    • Doriana Misceo,
    • Robert Stones,
    • Wenbin Wei,
    • Tom Hearn,
    • Mario Ventura,
    • Nicoletta Archidiacono,
    • Mariano Rocchi,
    • and Michael S. Jackson
    Genome Res. January 1, 2002 12: 67-80; doi:10.1101/gr.213702
    ..., and sequence context of the proximal and distal paralogs indicate that they may have been duplicated independently. To confirm this, we performed pairwise and multiple alignments between paralogs (Fig. 3 ; Table 2 ). The functional KIAA0187 gene shares 94.43% to 96.02% similarity to the distal paralogs (Table...
  2. Research: Hierarchical architecture of neo-sex chromosomes and accelerated adaptive evolution in tortricid moths
    • Fangyuan Yang,
    • Li-Jun Cao,
    • Petr Nguyen,
    • Zhong-Zheng Ma,
    • Jin-Cui Chen,
    • Wei Song,
    • and Shu-Jun Wei
    Genome Res. January 2025 35: 66-77; Published in Advance January 6, 2025, doi:10.1101/gr.279569.124
    ....05) (Supplemental Table S6) associated with the Wnt signaling pathway, a classical pathway related to morphology (Parr and McMahon 1994; Martin et al. 2012). We found several large-effect genes under strong positive selection, including ABCCs and HERC2 (Supplemental Table S5). These genes were well documented...
  3. REVIEW: Structure of Chromosomal Duplicons and their Role in Mediating Human Genomic Disorders
    • Yonggang Ji,
    • Evan E. Eichler,
    • Stuart Schwartz,
    • and Robert D. Nicholls
    Genome Res. May 1, 2000 10: 597-610; doi:10.1101/gr.10.5.597
    ...of duplications of a huge gene, HERC2 , although multiple rearrangements within the derived duplicons have occurred during evolution ( Amos-Landgraf et al. 1999 ; Ji et al. 1999 , 2000 ). The ancestral HERC2 gene encodes a giant protein, recessive mutations of which cause a neurological and developmental syndrome...
  4. LETTER: Independent intrachromosomal recombination events underlie the pericentric inversions of chimpanzee and gorilla chromosomes homologous to human chromosome 16
    • Violaine Goidts,
    • Justyna M. Szamalek,
    • Pieter J. de Jong,
    • David N. Cooper,
    • Nadia Chuzhanova,
    • Horst Hameister,
    • and Hildegard Kehrer-Sawatzki
    Genome Res. September 2005 15: 1232-1242; doi:10.1101/gr.3732505
    ....A., and Nicholls, R.D. 2000b . Structure of the highly conserved HERC2 gene and of multiple partially duplicated paralogs in human. Genome Res. 10 : 319 -329. ↵ Johnson, M.E., Viggiano, L., Bailey, J.A., Abdul-Rauf, M., Goodwin, G., Rocchi, M., and Eichler, E.E. 2001 . Positive selection of a gene family during...
  5. LETTER: The Mosaic Structure of Human Pericentromeric DNA: A Strategy for Characterizing Complex Regions of the Human Genome
    • Juliann E. Horvath,
    • Stuart Schwartz,
    • and Evan E. Eichler
    Genome Res. June 1, 2000 10: 839-852; doi:10.1101/gr.10.6.839
    .... This suggests an underlying DNA transposition mechanism for their duplication and dispersal. Partial or complete paralogous genomic segments have been identified for several gene loci including ALD, SLC6A8, NF1, HERC2, KGF, FRG1 , olfactory receptor, immunoglobulin variable κ-chain and immunoglobulin variable...
  6. Letter: Geographical structure and differential natural selection among North European populations
    • Brian P. McEvoy,
    • Grant W. Montgomery,
    • Allan F. McRae,
    • Samuli Ripatti,
    • Markus Perola,
    • Tim D. Spector,
    • Lynn Cherkas,
    • Kourosh R. Ahmadi,
    • Dorret Boomsma,
    • Gonneke Willemsen,
    • Jouke J. Hottenga,
    • Nancy L. Pedersen,
    • Patrik K.E. Magnusson,
    • Kirsten Ohm Kyvik,
    • Kaare Christensen,
    • Jaakko Kaprio,
    • Kauko Heikkilä,
    • Aarno Palotie,
    • Elisabeth Widen,
    • Juha Muilu,
    • Ann-Christine Syvänen,
    • Ulrika Liljedahl,
    • Orla Hardiman,
    • Simon Cronin,
    • Leena Peltonen,
    • Nicholas G. Martin,
    • and Peter M. Visscher
    Genome Res. May 2009 19: 804-814; Published in Advance March 5, 2009, doi:10.1101/gr.083394.108
    ...or multiple test adjusted significance. While this suggests that the selective signal is focused on immune function, it does not preclude the action of differential selection at some other individual loci. For example, the distribution of top FST points to one cluster of high values centered on the HERC2 gene...
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