Searching journal content for articles similar to Jagannathan and Bradley 26 (12): 1639.

Displaying results 1-6 of 6
For checked items
  1. Research: Environmentally induced plasticity of programmed DNA elimination boosts somatic variability in Paramecium tetraurelia
    • Valerio Vitali,
    • Rebecca Hagen,
    • and Francesco Catania
    Genome Res. October 2019 29: 1693-1704; Published in Advance September 23, 2019, doi:10.1101/gr.245332.118
    ...and the developing nuclei (Lepère et al. 2009), and iesRNAs that relay a secondary excision signal to the developing nuclei (Sandoval et al. 2014). Besides facilitating IES excision, these sexually restricted small RNAs allow at least part of the genetic variability in the parental somatic nucleus to be inherited...
  2. Research: A novel quantitative trait locus implicates Msh3 in the propensity for genome-wide short tandem repeat expansions in mice
    • Mikhail O. Maksimov,
    • Cynthia Wu,
    • David G. Ashbrook,
    • Flavia Villani,
    • Vincenza Colonna,
    • Nima Mousavi,
    • Nichole Ma,
    • Lu Lu,
    • Jonathan K. Pritchard,
    • Alon Goren,
    • Robert W. Williams,
    • Abraham A. Palmer,
    • and Melissa Gymrek
    Genome Res. May 2023 33: 689-702; Published in Advance May 1, 2023, doi:10.1101/gr.277576.122
    ...is strongest when including all epochs (Supplemental Fig. S8). Further, the direction of effect is consistent across most epochs, with the exception of later epochs for which a smaller number of mutations have accumulated (Fig. 2C). Thus, we concluded the causal variant is segregating across the entire BXD...
    OPEN ACCESS ARTICLE
  3. Perspective: Constructing genomic maps of positive selection in humans: Where do we go from here?
    • Joshua M. Akey
    Genome Res. May 2009 19: 711-722; doi:10.1101/gr.086652.108
    ...selection is FST (Weir 1996). Several variants of the classic FST statistic have been developed and applied to -wide scans of selection in humans, such as population-specific FST statistics (Shriver et al 2004; Weir et al. 2005), as well as more computationally sophisticated Bayesian methods of inference...
  4. Perspective: Notable challenges posed by long-read sequencing for the study of transcriptional diversity and genome annotation
    • Carolina Monzó,
    • Adam Frankish,
    • and Ana Conesa
    Genome Res. April 2025 35: 583-592; Published in Advance March 3, 2025, doi:10.1101/gr.279865.124
    ...splicing (AS) has been observed in genes associated with synaptic plasticity and neuronal function (Larsen et al. 2017; Patowary et al. 2024). As cells age, the accumulation of TN increases errors in gene expression and disrupts pathway coordination, making cells more susceptible to functional decline...
    OPEN ACCESS ARTICLE
  5. Research: Massive variation of short tandem repeats with functional consequences across strains of Arabidopsis thaliana
    • Maximilian O. Press,
    • Rajiv C. McCoy,
    • Ashley N. Hall,
    • Joshua M. Akey,
    • and Christine Queitsch
    Genome Res. August 2018 28: 1169-1178; Published in Advance July 3, 2018, doi:10.1101/gr.231753.117
    ...(Shen et al. 2014). Specifically, CMT2 nonsense mutations in some populations are associated with temperature seasonality. We considered whether the extreme CMT2 STR alleles might be associated with these nonsense mutations. Instead, these extreme alleles exclusively occurred in strains with full...
  6. Research: Global regulatory features of alternative splicing across tissues and within the nervous system of C. elegans
    • Bina Koterniak,
    • Pallavi P. Pilaka,
    • Xicotencatl Gracida,
    • Lisa-Marie Schneider,
    • Iva Pritišanac,
    • Yun Zhang,
    • and John A. Calarco
    Genome Res. December 2020 30: 1766-1780; Published in Advance October 30, 2020, doi:10.1101/gr.267328.120
    ..., there remains much to be understood about the splicing factors and the cis sequence elements controlling tissue and neuron subtype-specific splicing patterns. By using translating ribosome affinity purification coupled with deep-sequencing (TRAP-seq) in Caenorhabditis elegans, we have obtained high coverage...
    OPEN ACCESS ARTICLE
For checked items

Search Results

New Search

Modify Results

Citation format:
Results / page:
Results order:

This search

  • Alert me when new articles matching this search are published
  • Download all citations on this page to my citation manager

Preprint Server



Current Issue

  1. March 2026, 36 (3)
  1. Current Issue
  1. Alert me to new issues of Genome Research