Searching journal content for articles similar to Itoh et al. 20 (4): 512.

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  1. Research: Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    • Maria Warnefors,
    • Katharina Mössinger,
    • Jean Halbert,
    • Tania Studer,
    • John L. VandeBerg,
    • Isa Lindgren,
    • Amir Fallahshahroudi,
    • Per Jensen,
    • and Henrik Kaessmann
    Genome Res. December 2017 27: 1961-1973; Published in Advance October 27, 2017, doi:10.1101/gr.225391.117
    ...demonstrate that miR-2954-3p disproportionally targets Z-linked genes in both chicken and zebra finch, which separated over 70 million years ago (Prum et al. 2015).As miR-2954-3p-induced dosage compensation appears to be a conserved feature of bird s, we speculated that predictions of dosage sensitivity...
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  2. LETTER: Fast-X on the Z: Rapid evolution of sex-linked genes in birds
    • Judith E. Mank,
    • Erik Axelsson,
    • and Hans Ellegren
    Genome Res. May 2007 17: 618-624; Published in Advance April 6, 2007, doi:10.1101/gr.6031907
    ...pattern, with male-biased genes over-represented on the chicken Z chromosome ( Kaiser and Ellegren 2006 ; Storchova and Divinia 2006 ), possibly because of incomplete dosage compensation in birds ( Itoh et al. 2007 ). However, the removal of genes with male-biased expression does not statistically alter...
  3. Research: Elasmobranch genome sequencing reveals evolutionary trends of vertebrate karyotype organization
    • Kazuaki Yamaguchi,
    • Yoshinobu Uno,
    • Mitsutaka Kadota,
    • Osamu Nishimura,
    • Ryo Nozu,
    • Kiyomi Murakumo,
    • Rui Matsumoto,
    • Keiichi Sato,
    • and Shigehiro Kuraku
    Genome Res. September 2023 33: 1527-1540; Published in Advance August 17, 2023, doi:10.1101/gr.276840.122
    ...a gnathostome-wide comparison of the syntenic location of one-to-one orthologs, including the zebra shark (Fig. 3B; Supplemental Fig. 3). A considerable proportion of the one-to-one orthologs are shared between eMAC and large chromosomes of chicken and spotted gar (Fig. 3B). The majority of the genomic regions...
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  4. Research: Regional epigenetic differentiation of the Z Chromosome between sexes in a female heterogametic system
    • Dan Sun,
    • Donna L. Maney,
    • Thomas S. Layman,
    • Paramita Chatterjee,
    • and Soojin V. Yi
    Genome Res. October 2019 29: 1673-1684; Published in Advance September 23, 2019, doi:10.1101/gr.248641.119
    ...related avian species, namely chicken and white-throated sparrow. We show that, in contrast to the pattern in mammals, male and female Z Chromosomes in these species exhibit highly similar patterns of DNA methylation, which is consistent with weak or absent dosage compensation. We further demonstrate...
  5. Research: Accumulation and ineffective silencing of transposable elements on an avian W Chromosome
    • Vera M. Warmuth,
    • Matthias H. Weissensteiner,
    • and Jochen B.W. Wolf
    Genome Res. April 2022 32: 671-681; Published in Advance February 11, 2022, doi:10.1101/gr.275465.121
    ...-linked, endogenous retroviruses (ERVs) in gonadal tissue of the emu, chicken, and zebra finch (Peona et al. 2021).Avian s harbor comparatively few TEs (∼4%–10%, compared with up to 60% in other tetrapod vertebrates) (Zhang et al. 2014; Gao et al. 2017; Sotero-Caio et al. 2017). However, the large clade of passerine...
  6. Research: Birth and expression evolution of mammalian microRNA genes
    • Julien Meunier,
    • Frédéric Lemoine,
    • Magali Soumillon,
    • Angélica Liechti,
    • Manuela Weier,
    • Katerina Guschanski,
    • Haiyang Hu,
    • Philipp Khaitovich,
    • and Henrik Kaessmann
    Genome Res. January 2013 23: 34-45; Published in Advance October 3, 2012, doi:10.1101/gr.140269.112
    ...levels, thus exerting Figure 5. Expression patterns of sex chromosome-linked and autosomal miRNAs. (A) Spatial expression pattern of miRNA genes on the therian X, platypus X1–X5, and bird Z chromosomes. Expression level distributions of miRNA genes shared among and specific to eutherians, marsupials...
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