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Research: Venus flytrap carnivorous lifestyle builds on herbivore defense strategies
- Felix Bemm,
- Dirk Becker,
- Christina Larisch,
- Ines Kreuzer,
- Maria Escalante-Perez,
- Waltraud X. Schulze,
- Markus Ankenbrand,
- Anna-Lena Van de Weyer,
- Elzbieta Krol,
- Khaled A. Al-Rasheid,
- Axel Mithöfer,
- Andreas P. Weber,
- Jörg Schultz,
- and Rainer Hedrich
Genome Res. June 2016 26: 812-825; Published in Advance May 4, 2016, doi:10.1101/gr.202200.115
...). To gain mechanistic insights into the molecular processes underlying the carnivory syndrome, we combined ultrastructural, physiological, and proteomic analyses with thorough transcriptome sequencing to analyze the prey-dependent changes in gross gene expression patterns and nutrient transport in relation...
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Method: Pathoscope: Species identification and strain attribution with unassembled sequencing data
- Owen E. Francis,
- Matthew Bendall,
- Solaiappan Manimaran,
- Changjin Hong,
- Nathan L. Clement,
- Eduardo Castro-Nallar,
- Quinn Snell,
- G. Bruce Schaalje,
- Mark J. Clement,
- Keith A. Crandall,
- and W. Evan Johnson
Genome Res. October 2013 23: 1721-1729; Published in Advance July 10, 2013, doi:10.1101/gr.150151.112
...data, new methodology needs to be developed that can accommodate large volumes of genetic data in a computationally efficient manner. We present a statistical framework to analyze raw next-generation sequence reads from purified or mixed environmental or targeted infected tissue samples for rapid...
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