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RESOURCE: The First-Generation Whole-Genome Radiation Hybrid Map in the Horse Identifies Conserved Segments in Human and Mouse Genomes
- Bhanu P. Chowdhary,
- Terje Raudsepp,
- Srinivas R. Kata,
- Glenda Goh,
- Lee V. Millon,
- Veronica Allan,
- François Piumi,
- Gérard Guérin,
- June Swinburne,
- Matthew Binns,
- Teri L. Lear,
- Jim Mickelson,
- James Murray,
- Douglas F. Antczak,
- James E. Womack,
- and Loren C. Skow
Genome Res. April 1, 2003 13: 742-751; doi:10.1101/gr.917503
...M.A. , Geiger H. , et al. ( 1999 ) A radiation hybrid map of the zebrafish . Nat. Genet. 23 : 86 – 89 . ↵ Godard S. , Vaiman A. , Schibler L. , Mariat D. , Vaiman D. , Cribiu E.P. , Guérin G. ( 2000 ) Cytogenetic localization of 44 new coding sequences in the horse. Mamm. Genome. 11 : 1093 – 1097...
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LETTER: The Zebrafish Annexin Gene Family
- Steven A. Farber,
- Robert A. De Rose,
- Eric S. Olson,
- and Marnie E. Halpern
Genome Res. June 2003 13: 1082-1096; doi:10.1101/gr.479603
.... Percentages represent the occurrence of the nodes. Trees were calculated from comparisons of the first 73–83 amino acids of the first ANX repeat. Mapping and Syntenic Analysis Zebrafish anxs were mapped using the LN54 Radiation Hybrid Panel as previously described ( Hukriede et al. 1999 ). Primers for each...
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ARTICLE: A Gene Expression Screen in Zebrafish Embryogenesis
- Tetsuhiro Kudoh,
- Michael Tsang,
- Neil A. Hukriede,
- Xiongfong Chen,
- Michael Dedekian,
- Christopher J. Clarke,
- Anne Kiang,
- Stephanie Schultz,
- Jonathan A. Epstein,
- Reiko Toyama,
- and Igor B. Dawid
Genome Res. December 1, 2001 11: 1979-1987; Published in Advance November 12, 2001, doi:10.1101/gr.209601
....N. , Paw B. , Postlethwait J.H. , et al. ( 1999 ) Radiation hybrid mapping of the zebrafish . Proc. Natl. Acad. Sci. 96 : 9745 – 9750 . ↵ Hukriede N.A. , Fisher D. , Epstein J.A. , Joly L. , Tellis P. , Zhou X. , Barbazuk B. , Cox K. , Fenton-Noriega L. , Hersey C. , et al. ( 2001 ) The LN54 radiation...
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LETTER: An Ordered Comparative Map of the Cattle and Human Genomes
- Mark R. Band,
- Joshua H. Larson,
- Mark Rebeiz,
- Cheryl A. Green,
- D. Wayne Heyen,
- Jena Donovan,
- Ryan Windish,
- Chad Steining,
- Prapti Mahyuddin,
- James E. Womack,
- and Harris A. Lewin
Genome Res. September 1, 2000 10: 1359-1368; doi:10.1101/gr.145900
...77843, USA Abstract A cattle–human whole-genome comparative map was constructed using parallel radiation hybrid (RH) mapping in conjunction with EST sequencing, database mining for unmapped cattle genes, and a predictive bioinformatics approach (COMPASS) for targeting specific homologous...
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METHODS: Rapid Mapping of Zebrafish Mutations With SNPs and Oligonucleotide Microarrays
- Heather L. Stickney,
- Jeremy Schmutz,
- Ian G. Woods,
- Caleb C. Holtzer,
- Mark C. Dickson,
- Peter D. Kelly,
- Richard M. Myers,
- and William S. Talbot
Genome Res. December 1, 2002 12: 1929-1934; doi:10.1101/gr.777302
...mapping in Drosophila melanogaster. Genome Res. 11 : 1100 – 1113 . ↵ Hukriede N. , Fisher D. , Epstein J. , Joly L. , Tellis P. , Zhou Y. , Barbazuk B. , Cox K. , Fenton-Noriega L. , Hersey C. , et al. ( 2001 ) The LN54 radiation hybrid map of zebrafish expressed sequences. Genome Res. 11 : 2127 – 2132...
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LETTER: The Syntenic Relationship of the Zebrafish and Human Genomes
- W. Bradley Barbazuk,
- Ian Korf,
- Candy Kadavi,
- Joshua Heyen,
- Stephanie Tate,
- Edmund Wun,
- Joseph A. Bedell,
- John D. McPherson,
- and Stephen L. Johnson
Genome Res. September 1, 2000 10: 1351-1358; doi:10.1101/gr.144700
...orthologs to compare the syntenic relationship of the zebrafish and human s. These included 25 genes and 228 ESTs mapped in this study on the LN54 zebrafish radiation hybrid panel ( Hukriede et al. 1999 ) in addition to 270 genes and ESTs with previously reported map positions ( Johnson et al. 1996...
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RESOURCE: Genetic Linkage Mapping of Zebrafish Genes and ESTs
- Peter D. Kelly,
- Felicia Chu,
- Ian G. Woods,
- Phuong Ngo-Hazelett,
- Timothy Cardozo,
- Hui Huang,
- Frankie Kimm,
- Lingya Liao,
- Yi-Lin Yan,
- Yingyao Zhou,
- Steven L. Johnson,
- Ruben Abagyan,
- Alexander F. Schier,
- John H. Postlethwait,
- and William S. Talbot
Genome Res. April 1, 2000 10: 558-567; doi:10.1101/gr.10.4.558
...; Gates et al. 1999 ). These gene maps have also been useful in comparative studies, which have identified groups of genes that are syntenic in zebrafish and other vertebrates. The recent advent of two radiation hybrid (RH) maps provides a complementary approach for mapping zebrafish genes ( Geisler et al...
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ARTICLE: Functional Divergence of Two Zebrafish Midkine Growth Factors Following Fish-Specific Gene Duplication
- Christoph Winkler,
- Matthias Schäfer,
- Jutta Duschl,
- Manfred Schartl,
- and Jean-Nicolas Volff
Genome Res. June 2003 13: 1067-1081; Published in Advance May 12, 2003, doi:10.1101/gr.1097503
...different linkage groups (LG) presenting synteny with human chromosome Hsa11. Duplicate genes on different linkage groups are shown. Radiation hybrid mapping was done using the LN54 mouse-zebrafish panel ( Hukriede et al. 2001 ). Only putative orthologies on Hsa11, Hsa15, and Hsa7 are shown. Putative...
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RESOURCE: A Subtracted cDNA Library from the Zebrafish (Danio rerio) Embryonic Inner Ear
- Roney S. Coimbra,
- Dominique Weil,
- Phillipe Brottier,
- Stéphane Blanchard,
- Michael Levi,
- Jean-Pierre Hardelin,
- Jean Weissenbach,
- and Christine Petit
Genome Res. June 1, 2002 12: 1007-1011; doi:10.1101/gr.227502
...Centre. Genetic linkage maps now cover the entire zebrafish ( Knapik et al. 1998 ; Postlethwait et al. 1998 ; Gates et al. 1999 ; Shimoda et al. 1999 ). In addition, two independent physical maps made from zebrafish–rodent radiation hybrid lines (LN54 and T51) are available, which together cover &gt;90...
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LETTER: The Repertoire of Na,K-ATPase α and β Subunit Genes Expressed in the Zebrafish, Danio rerio
- S. Johannes R. Rajarao,
- Victor A. Canfield,
- Manzoor-Ali P.K. Mohideen,
- Yi-Lin Yan,
- John H. Postlethwait,
- Keith C. Cheng,
- and Robert Levenson
Genome Res. July 1, 2001 11: 1211-1220; doi:10.1101/gr.186001
.... The remaining α subunit clone is most similar to the mammalian α2 subunit. Among the five β subunit genes, two are orthologs of the mammalian β1 isoform, one represents a β2 ortholog, and two are orthologous to the mammalian β3 subunit. Using zebrafish radiation hybrid and meiotic mapping panels, we determined...

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