Searching journal content for articles similar to Hughes et al. 11 (5): 771.

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  1. Research: The sea lamprey meiotic map improves resolution of ancient vertebrate genome duplications
    • Jeramiah J. Smith and
    • Melissa C. Keinath
    Genome Res. August 2015 25: 1081-1090; Published in Advance June 5, 2015, doi:10.1101/gr.184135.114
    ...The sea lamprey meiotic map improves resolution of ancient vertebrate duplications Jeramiah J. Smith and Melissa C. Keinath Department of Biology, University of Kentucky, Lexington, Kentucky 40506, USA Corresponding author: jjsmit3@uky.edu AbstractIt is generally accepted that many genes present...
  2. LETTER: The Human Hox-bearing Chromosome Regions Did Arise by Block or Chromosome (or Even Genome) Duplications
    • Dan Larhammar,
    • Lars-Gustav Lundin,
    • and Finn Hallböök
    Genome Res. December 1, 2002 12: 1910-1920; doi:10.1101/gr.445702
    ...duplications. They concluded in their article title that “Ancient duplications did not structure the human Hox-bearing chromosomes.” A commentary in the same issue stated that the authors “scrutinize the hypothesis with a series of the most rigorous tests to date,” and that these were “even more sophisticated...
  3. LETTER: Early vertebrate whole genome duplications were predated by a period of intense genome rearrangement
    • Andrew L. Hufton,
    • Detlef Groth,
    • Martin Vingron,
    • Hans Lehrach,
    • Albert J. Poustka,
    • and Georgia Panopoulou
    Genome Res. October 2008 18: 1582-1591; Published in Advance July 14, 2008, doi:10.1101/gr.080119.108
    ...that are conserved between amphioxus, human, zebrafish, fugu, and chicken (Supplemental Table S2). These widely conserved genes include the large Hox and Histone syntenic clusters, as well as several ancient tandemly duplicated genes that have preserved their linkage during evolution, including: (1) SMAD2/3–SMAD6...
  4. COMMENTARY: Testing the Parsimony Test of Genome Duplications: A Counterexample
    • Xun Gu and
    • Wei Huang
    Genome Res. January 1, 2002 12: 1-2; doi:10.1101/gr.214402
    ...) Extensive duplication and reshuffling in the Arabidopsis . Plant Cell 12 : 1093 – 1102 . Hughes A.L. da Silva J. Friedman R. ( 2001 ) Ancient duplication did not structure the human Hox-bearing chromosomes. Genome Res. 11 : 771 – 780 . Makalowski W. ( 2001 ) Are we polyploids? A brief history of one...
  5. ARTICLE: New Evidence for Genome-Wide Duplications at the Origin of Vertebrates Using an Amphioxus Gene Set and Completed Animal Genomes
    • Georgia Panopoulou,
    • Steffen Hennig,
    • Detlef Groth,
    • Antje Krause,
    • Albert J. Poustka,
    • Ralf Herwig,
    • Martin Vingron,
    • and Hans Lehrach
    Genome Res. June 2003 13: 1056-1066; doi:10.1101/gr.874803
    ..., if a similar rate of segmental duplications were assumed for the vertebrate lineage, it would be sufficient to destroy the original gene order, so that only traces of an ancient duplication would be detectable. This is in qualitative agreement with our results. We find duplicons that range in size from 0...
  6. LETTER: Analyses of the Extent of Shared Synteny and Conserved Gene Orders between the Genome of Fugu rubripes and Human 20q
    • Sarah F. Smith,
    • Philip Snell,
    • Frank Gruetzner,
    • Anthony J. Bench,
    • Thomas Haaf,
    • Judith A. Metcalfe,
    • Anthony R. Green,
    • and Greg Elgar
    Genome Res. May 1, 2002 12: 776-784; Published in Advance April 12, 2002, doi:10.1101/gr.221802
    .... Development Suppl. 1994 : 125 – 133 . ↵ Hughes A. , da Silva J. , Friedman R. ( 2001 ) Ancient duplications did not structure the human hox-bearing chromosomes. Genome Res. 11 : 771 – 780 . ↵ Moens C. , Cordes S. , Giorgianni M. , Barsh G. , Kimmel C. ( 1998 ) Equivalence in the genetic control of hindbrain...
  7. LETTER: Pattern and Timing of Gene Duplication in Animal Genomes
    • Robert Friedman and
    • Austin L. Hughes
    Genome Res. November 1, 2001 11: 1842-1847; Published in Advance October 15, 2001, doi:10.1101/gr.200601
    ...) Reconstruction of ancient molecular phylogeny. Mol. Phyl. Evol. 46 : 189 – 213 . ↵ Hughes A.L. ( 1998 ) Phylogenetic tests of the hypothesis of block duplication of homologous genes on human chromosomes 6, 9, and 1. Mol. Biol. Evol. 15 : 854 – 870 . ↵ ( 1999a ) Adaptive evolution of genes and s. ( Oxford...
  8. RESOURCE: The LN54 Radiation Hybrid Map of Zebrafish Expressed Sequences
    • Neil Hukriede,
    • Dan Fisher,
    • Jonathan Epstein,
    • Lucille Joly,
    • Patricia Tellis,
    • Yi Zhou,
    • Brad Barbazuk,
    • Kristine Cox,
    • Laura Fenton-Noriega,
    • Candace Hersey,
    • Jennifer Miles,
    • Xiaoming Sheng,
    • Anhua Song,
    • Rick Waterman,
    • Stephen L. Johnson,
    • Igor B. Dawid,
    • Mario Chevrette,
    • Leonard I. Zon,
    • John McPherson,
    • and Marc Ekker
    Genome Res. December 1, 2001 11: 2127-2132; Published in Advance November 12, 2001, doi:10.1101/gr.210601
    ...primers. PCR Methods Appl. 1 : 124 – 128 . ↵ Hudson T.J. , Stein L.D. , Gerety S.S. , Ma J. , Castle A.B. , Silva J. , Slonim D.K. , Baptista R. , Kruglyak L. , Xu S.H. , et al. ( 1995 ) An STS-based map of the human . Science 270 : 1945 – 1954 . ↵ Hughes A.L. , da Silva J. , Friedman R. ( 2001 ) Ancient...
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