Searching journal content for articles similar to Herwig et al. 9 (11): 1093.

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  1. RESOURCE: Generation, Annotation, Evolutionary Analysis, and Database Integration of 20,000 Unique Sea Urchin EST Clusters
    • Albert J. Poustka,
    • Detlef Groth,
    • Steffen Hennig,
    • Sabine Thamm,
    • Andrew Cameron,
    • Alfred Beck,
    • Richard Reinhardt,
    • Ralf Herwig,
    • Georgia Panopoulou,
    • and Hans Lehrach
    Genome Res. December 2003 13: 2736-2746; doi:10.1101/gr.1674103
    ...have generated here. The EST sequence set established here is the first for a basal nonchordate deuterostome on such a large scale. Together with hemichordates, echinoderms represent an important position in the evolution of deuterostomes as the most basal groups. Gene duplications are key processes...
  2. RESOURCE: An Oligonucleotide Fingerprint Normalized and Expressed Sequence Tag Characterized Zebrafish cDNA Library
    • Matthew D. Clark,
    • Steffen Hennig,
    • Ralf Herwig,
    • Sandy W. Clifton,
    • Marco A. Marra,
    • Hans Lehrach,
    • Stephen L. Johnson,
    • and the WU-GSC EST Group
    Genome Res. September 1, 2001 11: 1594-1602; Published in Advance August 16, 2001, doi:10.1101/gr.186901
    ...and visualization of gene indices. Trends Genet. 16 : 521 – 523 . ↵ Herwig R. , Poustka A.J. , Muller C. , Bull C. , Lehrach H. , O'Brien J. ( 1999 ) Large-scale clustering of cDNA-fingerprinting data. Genome Res. 9 : 1093 – 1105 . ↵ Herwig R. , Schmitt A.O. , Steinfath M. , O'Brien J. , Seidel H. , Meier-Ewert S...
  3. ARTICLE: New Evidence for Genome-Wide Duplications at the Origin of Vertebrates Using an Amphioxus Gene Set and Completed Animal Genomes
    • Georgia Panopoulou,
    • Steffen Hennig,
    • Detlef Groth,
    • Antje Krause,
    • Albert J. Poustka,
    • Ralf Herwig,
    • Martin Vingron,
    • and Hans Lehrach
    Genome Res. June 2003 13: 1056-1066; doi:10.1101/gr.874803
    ...(1248 genes; Table 1A ). If one or more large-scale gene duplication event(s) have occurred at the origin of vertebrates, one would expect that the majority of the single-copy CD/CDY groups will contain a single amphioxus ortholog as opposed to multiple human and mouse orthologs. Our results show...
  4. METHODS: Finding Genes in the C2C12 Osteogenic Pathway by k-Nearest-Neighbor Classification of Expression Data
    • Joachim Theilhaber,
    • Timothy Connolly,
    • Sergio Roman-Roman,
    • Steven Bushnell,
    • Amanda Jackson,
    • Kathy Call,
    • Teresa Garcia,
    • and Roland Baron
    Genome Res. January 1, 2002 12: 165-176; doi:10.1101/gr.182601
    ...study of osteogenesis, we presented a new method for analyzing large-scale gene expression data, and for extracting sets of genes relevant to given classes of biological processes. This method, embodied in the computer program GENNC , is based on a supervised learning approach, the kNN method, coupled...
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