Searching journal content for articles similar to Harr 16 (6): 730.

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  1. Research: Inference of selective forces on house mouse genomes during secondary contact in East Asia
    • Kazumichi Fujiwara,
    • Shunpei Kubo,
    • Toshinori Endo,
    • Toyoyuki Takada,
    • Toshihiko Shiroishi,
    • Hitoshi Suzuki,
    • and Naoki Osada
    Genome Res. March 2024 34: 366-375; Published in Advance March 20, 2024, doi:10.1101/gr.278828.123
    ...in the future.In this study, we have elucidated the genomic landscape of wild house mice in East Asia. In East Asian house mouse populations, which experienced secondary contact after the subspecies diverged, we have inferred the effects of natural/sexual selection and genomic conflict from the observed pattern...
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  2. Research: Great ape Y Chromosome and mitochondrial DNA phylogenies reflect subspecies structure and patterns of mating and dispersal
    • Pille Hallast,
    • Pierpaolo Maisano Delser,
    • Chiara Batini,
    • Daniel Zadik,
    • Mariano Rocchi,
    • Werner Schempp,
    • Chris Tyler-Smith,
    • and Mark A. Jobling
    Genome Res. April 2016 26: 427-439; Published in Advance February 16, 2016, doi:10.1101/gr.198754.115
    ...Great ape Y Chromosome and mitochondrial DNA phylogenies reflect subspecies structure and patterns of mating and dispersal Pille Hallast 1 , 2 , Pierpaolo Maisano Delser 1 , 6 , Chiara Batini 1 , Daniel Zadik 1 , Mariano Rocchi 3...
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  3. Research: Divergence patterns of genic copy number variation in natural populations of the house mouse (Mus musculus domesticus) reveal three conserved genes with major population-specific expansions
    • Željka Pezer,
    • Bettina Harr,
    • Meike Teschke,
    • Hiba Babiker,
    • and Diethard Tautz
    Genome Res. August 2015 25: 1114-1124; Published in Advance July 6, 2015, doi:10.1101/gr.187187.114
    ...function. The overall analysis shows that genic CNVs contribute more to population differentiation in mice than in humans and may promote and speed up population divergence.Studying genetic variation in natural populations is key to understanding the evolutionary processes that lead to divergence. Genomic...
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  4. Research: Gene flow, ancient polymorphism, and ecological adaptation shape the genomic landscape of divergence among Darwin's finches
    • Fan Han,
    • Sangeet Lamichhaney,
    • B. Rosemary Grant,
    • Peter R. Grant,
    • Leif Andersson,
    • and Matthew T. Webster
    Genome Res. June 2017 27: 1004-1015; Published in Advance April 25, 2017, doi:10.1101/gr.212522.116
    ...of Veterinary Integrative Biosciences, Texas A&M University, College Station, Texas 77843-4461, USA Genomic comparisons of closely related species have identified “islands” of locally elevated sequence divergence. Genomic islands may contain functional variants involved in local adaptation or reproductive...
  5. Research: Burkholderia pseudomallei sequencing identifies genomic clades with distinct recombination, accessory, and epigenetic profiles
    • Tannistha Nandi,
    • Matthew T.G. Holden,
    • Xavier Didelot,
    • Kurosh Mehershahi,
    • Justin A. Boddey,
    • Ifor Beacham,
    • Ian Peak,
    • John Harting,
    • Primo Baybayan,
    • Yan Guo,
    • Susana Wang,
    • Lee Chee How,
    • Bernice Sim,
    • Angela Essex-Lopresti,
    • Mitali Sarkar-Tyson,
    • Michelle Nelson,
    • Sophie Smither,
    • Catherine Ong,
    • Lay Tin Aw,
    • Chua Hui Hoon,
    • Stephen Michell,
    • David J. Studholme,
    • Richard Titball,
    • Swaine L. Chen,
    • Julian Parkhill,
    • and Patrick Tan
    Genome Res. January 2015 25: 129-141; Published in Advance September 18, 2014, doi:10.1101/gr.177543.114
    ....g., Type III and Type VI secretion systems, polysaccharide biosynthesis clusters), metabolic pathways, and environmental adaptation (Wiersinga et al. 2012). Besides conserved regions, accessory genes on mobile elements and genomic islands may also contribute to phenotypic and clinical differences...
  6. Research: Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum of Ficedula flycatchers
    • Reto Burri,
    • Alexander Nater,
    • Takeshi Kawakami,
    • Carina F. Mugal,
    • Pall I. Olason,
    • Linnea Smeds,
    • Alexander Suh,
    • Ludovic Dutoit,
    • Stanislav Bureš,
    • Laszlo Z. Garamszegi,
    • Silje Hogner,
    • Juan Moreno,
    • Anna Qvarnström,
    • Milan Ružić,
    • Stein-Are Sæther,
    • Glenn-Peter Sætre,
    • Janos Török,
    • and Hans Ellegren
    Genome Res. November 2015 25: 1656-1665; Published in Advance September 9, 2015, doi:10.1101/gr.196485.115
    ...starts emerging among populations within species, and differentiation islands evolve recurrently in the very same genomic regions among independent lineages. Contrary to expectations from models that interpret differentiation islands as genomic regions involved in reproductive isolation that are shielded...
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  7. LETTER: Genome-wide patterns of gene flow across a house mouse hybrid zone
    • Katherine C. Teeter,
    • Bret A. Payseur,
    • Leslie W. Harris,
    • Margaret A. Bakewell,
    • Lisa M. Thibodeau,
    • Janelle E. O’Brien,
    • James G. Krenz,
    • Maria A. Sans-Fuentes,
    • Michael W. Nachman,
    • and Priscilla K. Tucker
    Genome Res. January 2008 18: 67-76; Published in Advance November 19, 2007, doi:10.1101/gr.6757907
    ...hybrids . J. Genet. 12 : 101 – 109 . ↵ Harr, B. ( 2006 ) Genomic islands of differentiation between house mouse subspecies . Genome Res. 16 : 730 – 737 . ↵ Harrison, R.G. ( 1990 ) Hybrid zones: Windows on evolutionary process . Oxf. Surv. Evol. Biol. 7 : 69 – 128 . ↵ Hunt, W.G. , Selander, R.K. ( 1973...
  8. RESOURCE: Mouse consomic strains: Exploiting genetic divergence between Mus m. musculus and Mus m. domesticus subspecies
    • Sona Gregorová,
    • Petr Divina,
    • Radka Storchova,
    • Zdenek Trachtulec,
    • Vladana Fotopulosova,
    • Karen L. Svenson,
    • Leah Rae Donahue,
    • Beverly Paigen,
    • and Jiri Forejt
    Genome Res. March 2008 18: 509-515; Published in Advance February 6, 2008, doi:10.1101/gr.7160508
    ...Karen L Beverly Leah Rae Storchova genome;gr.7160508 1088-9051 10.1101/gr.7160508 Mouse consomic strains: Exploiting genetic divergence between Mus m. musculus and Mus m. domesticus subspecies Mouse consomic strains: Exploiting genetic divergence between Mus m. musculus and Mus m. domesticus subspecies...
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  9. LETTER: Genomic Microsatellites as Evolutionary Chronometers: A Test in Wild Cats
    • Carlos A. Driscoll,
    • Marilyn Menotti-Raymond,
    • George Nelson,
    • David Goldstein,
    • and Stephen J. O'Brien
    Genome Res. March 1, 2002 12: 414-423; doi:10.1101/gr.185702
    ...in the Gir peninsula may have restricted or interrupted gene flow with continental populations. Taken together, the geologic and genomic results indicate that island separation of Gir lions until 4000–5000 yr ago reduced ancestral variation appreciably, leading to observed phenotypic correlates of inbreeding...
  10. Research: Tissue-specific patterns of regulatory changes underlying gene expression differences among Ficedula flycatchers and their naturally occurring F1 hybrids
    • Carina F. Mugal,
    • Mi Wang,
    • Niclas Backström,
    • David Wheatcroft,
    • Murielle Ålund,
    • Marie Sémon,
    • S. Eryn McFarlane,
    • Ludovic Dutoit,
    • Anna Qvarnström,
    • and Hans Ellegren
    Genome Res. December 2020 30: 1727-1739; Published in Advance November 3, 2020, doi:10.1101/gr.254508.119
    ...hybrid zones such as the Swedish island of Öland (Saetre et al. 1999; Qvarnström et al. 2010). Their F1 hybrids suffer from low to totally compromised fertility (Alatalo et al. 1990; Ålund et al. 2013), low attractivity (Alatalo et al. 1982; Svedin et al. 2008), and abnormal metabolic rate (McFarlane et...
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