Searching journal content for articles similar to Han et al. 15 (5): 655.

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  1. Article: Diverse cis factors controlling Alu retrotransposition: What causes Alu elements to die?
    • Matthew S. Comeaux,
    • Astrid M. Roy-Engel,
    • Dale J. Hedges,
    • and Prescott L. Deininger
    Genome Res. April 2009 19: 545-555; Published in Advance March 9, 2009, doi:10.1101/gr.089789.108
    ...activity for a longer period of time (master loci), while some loci have limited activity as proposed by the stealth model ( Han et al. 2005 ), with the vast majority of Alu elements being retrotranspositionally incompetent. Transcription is still likely to be a major factor limiting the activity of many...
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  2. LETTER: Active Alu retrotransposons in the human genome
    • E. Andrew Bennett,
    • Heiko Keller,
    • Ryan E. Mills,
    • Steffen Schmidt,
    • John V. Moran,
    • Oliver Weichenrieder,
    • and Scott E. Devine
    Genome Res. December 2008 18: 1875-1883; Published in Advance October 3, 2008, doi:10.1101/gr.081737.108
    ..., K. , Xing, J. , Wang, H. , Hedges, D.J. , Garber, R.K. , Cordaux, R. , Batzer, M.A. ( 2005 ) Under the genomic radar: The stealth model of Alu amplification . Genome Res. 15 : 655 – 664 . ↵ Hedges, D.J. , Callinan, P.A. , Cordaux, R. , Xing, J. , Barnes, E. , Batzer, M.A. ( 2004 ) Differential Alu...
  3. Research: Discovery of a new repeat family in the Callithrix jacchus genome
    • Miriam K. Konkel,
    • Brygg Ullmer,
    • Erika L. Arceneaux,
    • Sreeja Sanampudi,
    • Sarah A. Brantley,
    • Robert Hubley,
    • Arian F.A. Smit,
    • and Mark A. Batzer
    Genome Res. May 2016 26: 649-659; Published in Advance February 25, 2016, doi:10.1101/gr.199075.115
    ...to as non-LTR retrotransposons. In primates, the twomajor non-LTR elements and the largest contributors to expansion are long interspersed element 1, L1 (LINE1) and the primate-specific Alu element, a short interspersed element (SINE) (International Human Genome Sequencing Consortium 2001; Cordaux et al...
  4. Research: Pedigree-based estimation of human mobile element retrotransposition rates
    • Julie Feusier,
    • W. Scott Watkins,
    • Jainy Thomas,
    • Andrew Farrell,
    • David J. Witherspoon,
    • Lisa Baird,
    • Hongseok Ha,
    • Jinchuan Xing,
    • and Lynn B. Jorde
    Genome Res. October 2019 29: 1567-1577; doi:10.1101/gr.247965.118
    ...Tables S11, S12). Indeed, the variety of de novo Alu sequences detected here corroborates the “stealth model” hypothesis of Alu amplification, in which there are multiple active subfamilies that proliferate, rather than one large, active subfamily/locus (Deininger et al. 1992; Deininger and Batzer 1999...
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  5. LETTER: Distinct mechanisms for trans-mediated mobilization of cellular RNAs by the LINE-1 reverse transcriptase
    • José L. Garcia-Perez,
    • Aurélien J. Doucet,
    • Alain Bucheton,
    • John V. Moran,
    • and Nicolas Gilbert
    Genome Res. May 2007 17: 602-611; Published in Advance April 6, 2007, doi:10.1101/gr.5870107
    ...:500, and 1:1000, respectively. Each mixture was used as a template in the primer-extension assay. We could reproducibly detect a signal in the 1:250 dilution sample. Nested PCR amplification Chimeric pseudogenes (snRNA/L1 and U6/ Alu ) were amplified using a nested PCR protocol on genomic DNAs derived from...
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