Searching journal content for articles similar to Hampson et al. 13 (5): 999.

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  1. Methods: Building Genomic Profiles for Uncovering Segmental Homology in the Twilight Zone
    • Cedric Simillion,
    • Klaas Vandepoele,
    • Yvan Saeys,
    • and Yves Van de Peer
    Genome Res. June 2004 14: 1095-1106; doi:10.1101/gr.2179004
    ....L. 2002 . Fast algorithms for large-scale alignment and comparison. Nucleic Acids Res. 30 : 2478 –2483. ↵ Hampson, S., McLysaght, A., Gaut, B., and Baldi, P. 2003 . LineUp: Statistical detection of chromosomal homology with application to plant comparative genomics. Genome Res. 13 : 999 –1010. ↵ Ilic, K...
  2. LETTER: Patterns of Chromosomal Duplication in Maize and Their Implications for Comparative Maps of the Grasses
    • Brandon S. Gaut
    Genome Res. January 1, 2001 11: 55-66; doi:10.1101/gr.160601
    ...on nonoverlapping runs, which could make the method overly conservative. The general applicability of the colinearity test has yet to be determined, but a similar approach can be applied to other mapped plant s that contain extensive chromosomal duplications, such as soybean ( Grant et al. 2000 ), cotton ( Brubaker...
  3. Methods: SyMAP: A system for discovering and viewing syntenic regions of FPC maps
    • Carol Soderlund,
    • William Nelson,
    • Austin Shoemaker,
    • and Andrew Paterson
    Genome Res. September 2006 16: 1159-1168; doi:10.1101/gr.5396706
    ...) DAGchainer: A tool for mining segmental duplications and synteny . Bioinformatics 20 : 3643 – 3646 . ↵ Hampson S. , McLysaght A. , Gaut B. , Baldi P. ( 2003 ) LineUp: Statistical detection of chromosomal homology with application to plant comparative genomics . Genome Res. 13 : 999 – 1010 . ↵ Hubbard T...
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  4. LETTER: Comparative DNA Sequence Analysis of Wheat and Rice Genomes
    • Mark E. Sorrells,
    • Mauricio La Rota,
    • Catherine E. Bermudez-Kandianis,
    • Robert A. Greene,
    • Ramesh Kantety,
    • Jesse D. Munkvold,
    • Miftahudin,
    • Ahmed Mahmoud,
    • Xuefeng Ma,
    • Perry J. Gustafson,
    • Lili L. Qi,
    • Benjamin Echalier,
    • Bikram S. Gill,
    • David E. Matthews,
    • Gerard R. Lazo,
    • Shiaoman Chao,
    • Olin D. Anderson,
    • Hugh Edwards,
    • Anna M. Linkiewicz,
    • Jorge Dubcovsky,
    • Eduard D. Akhunov,
    • Jan Dvorak,
    • Deshui Zhang,
    • Henry T. Nguyen,
    • Junhua Peng,
    • Nora L.V. Lapitan,
    • Jose L. Gonzalez-Hernandez,
    • James A. Anderson,
    • Khwaja Hossain,
    • Venu Kalavacharla,
    • Shahryar F. Kianian,
    • Dong-Woog Choi,
    • Timothy J. Close,
    • Muharrem Dilbirligi,
    • Kulvinder S. Gill,
    • Camille Steber,
    • Mary K. Walker-Simmons,
    • Patrick E. McGuire,
    • and Calvin O. Qualset
    Genome Res. August 2003 13: 1818-1827; doi:10.1101/gr.1113003
    ...and assembled in superior varieties. Comparative Mapping of Poaceae Comparative genomics in the grass family (Poaceae) is of particular importance. The family comprises a number of economically important plants, such as rice ( Oryza sativa L.), maize ( Zea mays L.), wheat ( Triticum aestivum L.), sorghum...
  5. PERSPECTIVE: What is a gene, post-ENCODE? History and updated definition
    • Mark B. Gerstein,
    • Can Bruce,
    • Joel S. Rozowsky,
    • Deyou Zheng,
    • Jiang Du,
    • Jan O. Korbel,
    • Olof Emanuelsson,
    • Zhengdong D. Zhang,
    • Sherman Weissman,
    • and Michael Snyder
    Genome Res. June 2007 17: 669-681; doi:10.1101/gr.6339607
    ...(“origin”). The related word genetics was used by the geneticist William Bateson in 1905 ( http://www.jic.ac.uk/corporate/about/bateson.htm ). Mendel showed that when breeding plants, some traits such as height or flower color do not appear blended in their offspring—that is, these traits are passed...
    OPEN ACCESS ARTICLE
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