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  1. ...subfamilies across the animal phylogeny. The forces and mechanisms underlying rapid ZNF evolution remain poorly understood, but there is growing evidence that, in tetrapods, the targeting and repression of lineage-specific transposable elements (TEs) plays a critical role in the evolution of the Krüppel...
  2. ...) What is the significance and evolutionary role of particular tissues in the retention of duplicate genes? (3) What is the potential contribution of paralogs to lineage-specific phenotypic evolution? 3Joint senior authors Corresponding authors: katerina.guschanski@ebc.uu.se, h...
  3. ...; Faculty of Genetics, Texas A&M University, College Station, Texas 77843-4458, USA Abstract The strategic importance of the genome sequence of the gray, short-tailed opossum, Monodelphis domestica , accrues from both the unique phylogenetic position of metatherian (marsupial) mammals...
  4. ..., Monodelphis domestica: Evolution of lineage-specific genes and giant chromosomes. Genome Res 17: 969– 981. Gregory TR, Nicol JA, TammH, Kullman B, Kullman K, Leitch IJ, Murray BG, Kapraun DF, Greilhuber J, Bennett MD. 2007. Eukaryotic size databases. Nucleic Acids Res 35: D332–D338. Griffin DK, Robertson LB...
  5. ...species (each with one or more genes); (2) those containing only a subset of species and that are monophyletic (i.e., involving lineage-specific deletions and rapid evolution); and (3) those where absences have led to nonmonophyly (i.e., absences due to gene or orthology prediction errors, or assembly...
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