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Research: Rapid evolution and strain turnover in the infant gut microbiome
- Daisy W. Chen and
- Nandita R. Garud
Genome Res. June 2022 32: 1124-1136; Published in Advance May 11, 2022, doi:10.1101/gr.276306.121
...; Groussin et al. 2021; Roodgar et al. 2021). However, rapid evolutionary changes within species frequently are not associated with changes in species’ relative abundances (Roodgar et al. 2021), illustrating that intra-species genetic variation can reveal changes in the microbiome that species’ abundances...
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Research: Identical bacterial populations colonize premature infant gut, skin, and oral microbiomes and exhibit different in situ growth rates
- Matthew R. Olm,
- Christopher T. Brown,
- Brandon Brooks,
- Brian Firek,
- Robyn Baker,
- David Burstein,
- Karina Soenjoyo,
- Brian C. Thomas,
- Michael Morowitz,
- and Jillian F. Banfield
Genome Res. April 2017 27: 601-612; Published in Advance January 10, 2017, doi:10.1101/gr.213256.116
....” Genome-resolved methods have yet to be widely applied to the human microbiome, and thus the level of microdiversity present within human-associated microbial populations is largely unknown. Strain-level diversity is common across other ecosystems and is hypothesized to contribute to the stability...
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