Searching journal content for articles similar to Goldstein et al. 27 (3): 462.

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  1. Research: Profiling neural editomes reveals a molecular mechanism to regulate RNA editing during development
    • Suba Rajendren,
    • Alfa Dhakal,
    • Pranathi Vadlamani,
    • Jack Townsend,
    • Sarah N. Deffit,
    • and Heather A. Hundley
    Genome Res. January 2021 31: 27-39; Published in Advance December 18, 2020, doi:10.1101/gr.267575.120
    ...Corresponding author: hahundle@indiana.eduAbstractAdenosine (A) to inosine (I) RNA editing contributes to transcript diversity and modulates gene expression in a dynamic, cell type–specific manner. During mammalian brain development, editing of specific adenosines increases, whereas the expression of A-to-I...
  2. Research: Cancer-associated rs6983267 SNP and its accompanying long noncoding RNA CCAT2 induce myeloid malignancies via unique SNP-specific RNA mutations
    • Maitri Y. Shah,
    • Manuela Ferracin,
    • Valentina Pileczki,
    • Baoqing Chen,
    • Roxana Redis,
    • Linda Fabris,
    • Xinna Zhang,
    • Cristina Ivan,
    • Masayoshi Shimizu,
    • Cristian Rodriguez-Aguayo,
    • Mihnea Dragomir,
    • Katrien Van Roosbroeck,
    • Maria Ines Almeida,
    • Maria Ciccone,
    • Daniela Nedelcu,
    • Maria Angelica Cortez,
    • Taghi Manshouri,
    • Steliana Calin,
    • Muharrem Muftuoglu,
    • Pinaki P. Banerjee,
    • Mustafa H. Badiwi,
    • Jan Parker-Thornburg,
    • Asha Multani,
    • James William Welsh,
    • Marcos Roberto Estecio,
    • Hui Ling,
    • Ciprian Tomuleasa,
    • Delia Dima,
    • Hui Yang,
    • Hector Alvarez,
    • M. James You,
    • Milan Radovich,
    • Elizabeth Shpall,
    • Muller Fabbri,
    • Katy Rezvani,
    • Leonard Girnita,
    • Ioana Berindan-Neagoe,
    • Anirban Maitra,
    • Srdan Verstovsek,
    • Riccardo Fodde,
    • Carlos Bueso-Ramos,
    • Mihai Gagea,
    • Guillermo Garcia Manero,
    • and George A. Calin
    Genome Res. April 2018 28: 432-447; Published in Advance March 22, 2018, doi:10.1101/gr.225128.117
    ...(Freedman et al. 2011). Through an integrated approach, we successfully deciphered the clinical importance of cancer-risk associated rs6983267 and the accompanying CCAT2 lncRNA. Constitutive overexpression of allele-specific CCAT2 altered the global gene expression landscape in the hematopoietic cells...
  3. Method: Identification of bona fide B2 SINE retrotransposon transcription through single-nucleus RNA-seq of the mouse hippocampus
    • Sara B. Linker,
    • Lynne Randolph-Moore,
    • Kalyani Kottilil,
    • Fan Qiu,
    • Baptiste N. Jaeger,
    • Jerika Barron,
    • and Fred H. Gage
    Genome Res. November 2020 30: 1643-1654; Published in Advance October 29, 2020, doi:10.1101/gr.262196.120
    ...to quantify transposable element (TE) RNA expression, such as RT-qPCR and RNA-seq, that do not distinguish between TEs expressed from their own promoter (bona fide) and TEs that are transcribed from a neighboring gene promoter such as within an intron or exon. This distinction is important owing...
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