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LETTER: Generation and Analysis of 25 Mb of Genomic DNA from the Pufferfish Fugu rubripes by Sequence Scanning
- Greg Elgar,
- Melody S. Clark,
- Stephen Meek,
- Sarah Smith,
- Sarah Warner,
- Yvonne J.K. Edwards,
- Nassima Bouchireb,
- Amanda Cottage,
- Giles S.H. Yeo,
- Yagnesh Umrania,
- Gary Williams,
- and Sydney Brenner
Genome Res. October 1, 1999 9: 960-971; doi:10.1101/gr.9.10.960
...Generation and Analysis of 25 Mb of Genomic DNA from the Pufferfish Fugu rubripes by Sequence Scanning Greg Elgar 1 , 5 , Melody S. Clark 1 , Stephen Meek 1 , Sarah Smith 1 , Sarah Warner 1 , Yvonne J.K. Edwards 1 , Nassima...
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LETTER: Genomic Sequence Analysis of Fugu rubripes CFTR and Flanking Genes in a 60 kb Region Conserving Synteny with 800 kb of Human Chromosome 7
- Heather Davidson,
- Martin S. Taylor,
- Ann Doherty,
- A. Christopher Boyd,
- and David J. Porteous
Genome Res. August 1, 2000 10: 1194-1203; doi:10.1101/gr.10.8.1194
...of genomic DNA around the wnt1 locus of Fugu rubripes. Genome Res. 9 : 251 – 258 . ↵ Gilley J. , Armes N. , Fried M. ( 1997 ) Fugu is not a good mammalian model. Nature 385 : 305 – 306 . ↵ Gilley J. , Fried M. ( 1999 ) Extensive gene order differences within regions of conserved synteny between the fugu...
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ARTICLE: Surveying Saccharomyces Genomes to Identify Functional Elements by Comparative DNA Sequence Analysis
- Paul F. Cliften,
- LaDeana W. Hillier,
- Lucinda Fulton,
- Tina Graves,
- Tracie Miner,
- Warren R. Gish,
- Robert H. Waterston,
- and Mark Johnston
Genome Res. July 1, 2001 11: 1175-1186; doi:10.1101/gr.182901
...Surveying Saccharomyces Genomes to Identify Functional Elements by Comparative DNA Sequence Analysis Paul F. Cliften 1 , LaDeana W. Hillier 2 , Lucinda Fulton 2 , Tina Graves 2 , Tracie Miner 2 , Warren R. Gish 1 , 2...
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ARTICLE: Comparative Analysis of Vertebrate Dystrophin Loci Indicate Intron Gigantism as a Common Feature
- Uberto Pozzoli,
- Greg Elgar,
- Rachele Cagliani,
- Laura Riva,
- Giacomo P. Comi,
- Nereo Bresolin,
- Alessandra Bardoni,
- and Manuela Sironi
Genome Res. May 1, 2003 13: 764-772; doi:10.1101/gr.776503
.... ↵ Gellner K. , Brenner S. ( 1999 ) Analysis of 148 kb of genomic DNA around the wnt1 locus of Fugu rubripes. Genome Res. 9 : 251 – 258 . ↵ Gorecki D.C. , Monaco A.P. , Derry J.M.J. , Walker A.P. , Barnard E.A. , Barnard P.J. ( 1992 ) Expression of four alternative dystrophin transcripts in brain regions...
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ARTICLE: A Genetic Linkage Map for Zebrafish: Comparative Analysis and Localization of Genes and Expressed Sequences
- Michael A. Gates,
- Lisa Kim,
- Elizabeth S. Egan,
- Timothy Cardozo,
- Howard I. Sirotkin,
- Scott T. Dougan,
- Deval Lashkari,
- Ruben Abagyan,
- Alexander F. Schier,
- and William S. Talbot
Genome Res. April 1, 1999 9: 334-347; doi:10.1101/gr.9.4.334
.... These polymorphisms included 105 SSCPs from fully sequenced cDNAs and ESTs (of which 104 were mapped, see below) that defined previously unmapped genes (Fig. 1 ; Table 1 ). We also developed SSCPs to map 10 sequence-tagged sites (STSs) derived from genomic clones in BAC, PAC, and YAC vectors and other sequences...
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LETTER: Expression Profiling and Comparative Genomics Identify a Conserved Regulatory Region Controlling Midline Expression in the Zebrafish Embryo
- Thomas Dickmeis,
- Charles Plessy,
- Sepand Rastegar,
- Pia Aanstad,
- Ralf Herwig,
- Frédéric Chalmel,
- Nadine Fischer,
- and Uwe Strähle
Genome Res. February 2004 14: 228-238; Published in Advance January 12, 2004, doi:10.1101/gr.1819204
...of the Japanese puffer fish, Fugu rubripes. Proc. Natl. Acad. Sci. 92 : 1684 -1688. ↵ Bagheri-Fam, S., Ferraz, C., Demaille, J., Scherer, G., and Pfeifer, D. 2001 . Comparative genomics of the SOX9 region in human and Fugu rubripes : Conservation of short regulatory sequence elements within large intergenic...
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LETTER: Transcriptional Regulation of the Stem Cell Leukemia Gene (SCL) — Comparative Analysis of Five Vertebrate SCL Loci
- Berthold Göttgens,
- Linda M. Barton,
- Michael A. Chapman,
- Angus M. Sinclair,
- Bjarne Knudsen,
- Darren Grafham,
- James G.R. Gilbert,
- Jane Rogers,
- David R. Bentley,
- and Anthony R. Green
Genome Res. May 1, 2002 12: 749-759; doi:10.1101/gr.45502
...rearrangements occuring during evolution may shed light on the location of transcriptional elements necessary to produce conserved patterns of gene expression. We have previously characterized and sequenced the SCL genomic loci from the pufferfish, fugu rubripes ( Barton et al. 2001 ) and have found...
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LETTER: Ancient Genome Duplications Did Not Structure the Human Hox-Bearing Chromosomes
- Austin L. Hughes,
- Jack da Silva,
- and Robert Friedman
Genome Res. May 1, 2001 11: 771-780; Published in Advance April 11, 2001, doi:10.1101/gr.160001
...) Gene duplication and the structure of eukaryotic s. Genome Res. 11 : 373 – 381 . ↵ Gellner K. , Brenner S. ( 1999 ) Analysis of 148 kb of genomic DNA around the wnt locus of Fugu rubripes. Genome Res. 9 : 251 – 258 . ↵ Hughes A.L. ( 1994 ) The evolution of functionally novel proteins after gene...

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