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LETTER: A Fine Physical Map of the Rice Chromosome 4
- Qiang Zhao,
- Yu Zhang,
- Zhukuan Cheng,
- Mingsheng Chen,
- Shengyue Wang,
- Qi Feng,
- Yucheng Huang,
- Ying Li,
- Yesheng Tang,
- Bo Zhou,
- Zhehua Chen,
- Shuliang Yu,
- Jingjie Zhu,
- Xin Hu,
- Jie Mu,
- Kai Ying,
- Pei Hao,
- Lei Zhang,
- Yiqi Lu,
- Lei S. Zhang,
- Yilei Liu,
- Zhen Yu,
- Danlin Fan,
- Qijun Weng,
- Ling Chen,
- Tingting Lu,
- Xiaohui Liu,
- Peixin Jia,
- Tongguo Sun,
- Yongrui Wu,
- Yujun Zhang,
- Ying Lu,
- Can Li,
- Rong Wang,
- Haiyan Lei,
- Tao Li,
- Hao Hu,
- Mei Wu,
- Runquan Zhang,
- Jianping Guan,
- Jia Zhu,
- Gang Fu,
- Minghong Gu,
- Guofan Hong,
- Yongbiao Xue,
- Rod Wing,
- Jiming Jiang,
- and Bin Han
Genome Res. May 1, 2002 12: 817-823; doi:10.1101/gr.48902
...subspecies O. sativa indica Guangluai 4 and 182 RFLP and 407 expressed sequence tag (EST) markers with the fingerprinted data of the Nipponbare genome. The map consists of 11 contigs with a total length of 34.5 Mb covering 94% of the estimated chromosome size (36.8 Mb). BAC clones corresponding...
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LETTER: High-Resolution Transcript Map of the Region Spanning D12S1629 and D12S312 at Chromosome 12q13: Triple A Syndrome-Linked Region
- Hyoungnam Lee,
- Eunkyung Choi,
- Young Seomun,
- K. Montgomery,
- A. Huebner,
- Eunice Lee,
- Stephanie Lau,
- Choun-Ki Joo,
- R. Kucherlapati,
- and Sung-Joo Kim Yoon
Genome Res. October 1, 2000 10: 1561-1567; doi:10.1101/gr.142100
...map we report represents the region encompassed by P273P14/SP6 proximally and D12S312 distally (Fig. 1 , provided as insert). This region of 4.4 cM from 66.8 to 71.2 cM of Généthon genetic map was represented by 217 clones in a single contig. The map consists of 81 BACs, 45 PACs, and 91 cosmids...
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LETTER: Contig Maps and Genomic Sequencing Identify Candidate Genes in the Usher 1C Locus
- Michael J. Higgins,
- Colleen D. Day,
- Nancy J. Smilinich,
- L. Ni,
- Paul R. Cooper,
- Norma J. Nowak,
- Chris Davies,
- Pieter J. de Jong,
- Fielding Hejtmancik,
- Glen A. Evans,
- Richard J.H. Smith,
- and Thomas B. Shows
Genome Res. January 1, 1998 8: 57-68; doi:10.1101/gr.8.1.57
...marker D11S921. To facilitate gene identification, the critical region has been converted into P1 artificial chromosome (PAC) clones using sequence-tagged sites (STSs) mapped to the YAC contig, Alu –PCR products generated from the YACs, and PAC end probes. A contig of &gt;50 PAC clones has been assembled...
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ARTICLE: A high-fidelity physical map of human chromosome 21q in yeast artificial chromosomes.
- J R Korenberg,
- X N Chen,
- S Mitchell,
- S Fannin,
- S Gerwehr,
- D Cohen,
- and I Chumakov
Genome Res. December 1995 5: 427-443; doi:10.1101/gr.5.5.427
...and overlapping YACs was reported by Nizetic et al. (1994), who also developed a cosmid pocket map for 145 in- tervals of chromosome 21 integrated with the YAC map. The development of sequence-ready contigs for any chromosome r quires ahighly ac- curate physical map. Therefore, the physical maps developed...
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RESEARCH: A High-Resolution Physical and Transcript Map of the Cri du Chat Region of Human Chromosome 5p
- Deanna M. Church,
- Julie Yang,
- Maureen Bocian,
- Rita Shiang,
- and John J. Wasmuth
Genome Res. August 1, 1997 7: 787-801; doi:10.1101/gr.7.8.787
.... Utilizing a variety of resources including a natural deletion panel, a chromosome specific radiation hybrid panel, and YAC, PAC, and BAC genomic clones we have ordered &gt;60 STSs within this region. Approximately 45% of these STSs were obtained from publicly available whole maps, thus allowing...
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LETTER: Physical Map of Human 6p21.2–6p21.3: Region Flanking the Centromeric End of the Major Histocompatibility Complex
- Nicos Tripodis,
- Ruth Mason,
- Sean J. Humphray,
- Angela F. Davies,
- Jethro A. Herberg,
- John Trowsdale,
- Dean Nizetic,
- Gabriele Senger,
- and Jiannis Ragoussis
Genome Res. June 1, 1998 8: 631-643; doi:10.1101/gr.8.6.631
...the complete genomic sequencing of this region of chromosome 6. The contig contains the genes encoding CSBP, p21, HSU09564 serine kinase, ZNF76, TCP-11, RPS10, HMGI(Y), BAK, and the human homolog of Tctex-7 (HSET). The GLO1 gene was mapped further centromeric in the 6p21.2–6p21.1 region toward TCTE-1...
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REPORT: Characterization of Clustered MHC-Linked Olfactory Receptor Genes in Human and Mouse
- Ruth M. Younger,
- Claire Amadou,
- Graeme Bethel,
- Anke Ehlers,
- Kirsten Fischer Lindahl,
- Simon Forbes,
- Roger Horton,
- Sarah Milne,
- Andrew J. Mungall,
- John Trowsdale,
- Armin Volz,
- Andreas Ziegler,
- and Stephan Beck
Genome Res. April 1, 2001 11: 519-530; Published in Advance March 13, 2001, doi:10.1101/gr.160301
.... It remains to be seen whether common control mechanisms govern the expression of OR genes in different species, and different tissues. Our study provides the foundation of such analyses for the MHC-linked OR genes. METHODS Mapping, Sequencing and Analysis A sequence-ready contig of the 800-kb region between...

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