Searching journal content for articles similar to Crabtree et al. 11 (10): 1746.

Displaying results 1-10 of 32

For checked items

view abstracts
download to citation manager

Select this article
Methods: Efficient high-resolution deletion discovery in Caenorhabditis elegans by array comparative genomic hybridization
- Jason S. Maydan,
- Stephane Flibotte,
- Mark L. Edgley,
- Joanne Lau,
- Rebecca R. Selzer,
- Todd A. Richmond,
- Nathan J. Pofahl,
- James H. Thomas,
- and Donald G. Moerman
Genome Res. March 2007 17: 337-347; Published in Advance January 31, 2007, doi:10.1101/gr.5690307
...an oligonucleotide-based approach with a high-density array format (∼385,000 unique probes) is already leading to widespread adoption of this method for high-resolution mapping of DNA breakpoints for larger sized chromosomal rearrangements in tumors and microdeletion syndromes in humans ( Pollack et al. 2002...
Select this article
LETTER: A Fine Physical Map of the Rice Chromosome 4
- Qiang Zhao,
- Yu Zhang,
- Zhukuan Cheng,
- Mingsheng Chen,
- Shengyue Wang,
- Qi Feng,
- Yucheng Huang,
- Ying Li,
- Yesheng Tang,
- Bo Zhou,
- Zhehua Chen,
- Shuliang Yu,
- Jingjie Zhu,
- Xin Hu,
- Jie Mu,
- Kai Ying,
- Pei Hao,
- Lei Zhang,
- Yiqi Lu,
- Lei S. Zhang,
- Yilei Liu,
- Zhen Yu,
- Danlin Fan,
- Qijun Weng,
- Ling Chen,
- Tingting Lu,
- Xiaohui Liu,
- Peixin Jia,
- Tongguo Sun,
- Yongrui Wu,
- Yujun Zhang,
- Ying Lu,
- Can Li,
- Rong Wang,
- Haiyan Lei,
- Tao Li,
- Hao Hu,
- Mei Wu,
- Runquan Zhang,
- Jianping Guan,
- Jia Zhu,
- Gang Fu,
- Minghong Gu,
- Guofan Hong,
- Yongbiao Xue,
- Rod Wing,
- Jiming Jiang,
- and Bin Han
Genome Res. May 1, 2002 12: 817-823; doi:10.1101/gr.48902
...(cM), and centromere (in yellow) are indicated. ( B ) A physical map. The portions of the 11 BAC contigs covering 34.5 Mb of the chromosome are in orange and the gaps in plain. The physical distance is indicated (Mb). The maps also show a discrepancy of two markers R2502 (3.1 cM) and R2373 (0 c...
Select this article
RESOURCE: A Bacterial Artificial Chromosome Library for Sequencing the Complete Human Genome
- Kazutoyo Osoegawa,
- Aaron G. Mammoser,
- Chenyan Wu,
- Eirik Frengen,
- Changjiang Zeng,
- Joseph J. Catanese,
- and Pieter J. de Jong
Genome Res. March 1, 2001 11: 483-496; doi:10.1101/gr.169601
..., the ends will be from different genomic regions. To examine the level of rearrangements within clones, the contig was interrogated with ∼300 markers for inconsistent map results. In addition, all the BACs in the contig also were fingerprinted using high-resolution restriction fragment pattern analysis...
Select this article
REPORT: Comparative Genome Mapping in the Sequence-based Era: Early Experience with Human Chromosome 7
- James W. Thomas,
- Tyrone J. Summers,
- Shih-Queen Lee-Lin,
- Valerie V. Braden Maduro,
- Jacquelyn R. Idol,
- Stephen D. Mastrian,
- Joseph F. Ryan,
- D. Curtis Jamison,
- and Eric D. Green
Genome Res. May 1, 2000 10: 624-633; doi:10.1101/gr.10.5.624
...with the current refined comparative map of human chromosome 7, even after inflating our estimated average conserved segment size by ∼15% to account for the portion of the chromosome that cannot currently be assigned to a position in mouse (see below). Whether this difference reflects refined mapping data...
Select this article
RESOURCE: A Resource of Mapped Human Bacterial Artificial Chromosome Clones
- Vivian G. Cheung,
- Heather L. Dalrymple,
- Sandya Narasimhan,
- Jason Watts,
- Gregory Schuler,
- Anton K. Raap,
- Michael Morley,
- and Alan Bruzel
Genome Res. October 1, 1999 9: 989-993; doi:10.1101/gr.9.10.989
...), some false-positive clones might be positive signals that were carried over from previous hybridizations. A small portion of false-positive clones were adjacent to true positive clones, these might be the result of contamination in the filter preparation process. The clones that mapped to each STS...
Select this article
LETTER: A Sequence-Ready BAC Contig of the GABA_A Receptor Gene Cluster Gabrg1–Gabra2–Gabrb1 on Mouse Chromosome 5
- Andreas Lengeling,
- Tim Wiltshire,
- Chris Otmani,
- and Maja Bućan
Genome Res. August 1, 1999 9: 732-738; doi:10.1101/gr.9.8.732
..., Gabra2 and Gabrb1 , has been determined. This high-resolution physical map will provide the basis for functional characterization and sequencing of genes located in this cluster. RESULTS The contig spanning the GABA A receptor genes in the central portion of mouse chromosome 5 was generated...
Select this article
METHODS: Contigs Built with Fingerprints, Markers, and FPC V4.7
- Carol Soderlund,
- Sean Humphray,
- Andrew Dunham,
- and Lisa French
Genome Res. November 1, 2000 10: 1772-1787; Published in Advance November 8, 2000, doi:10.1101/gr.GR-1375R
...length is 145 Mb of which 20 Mb is heterochromatin; only the euchromatic portion was seeded so the length used is 125 Mb. The physical map of chromosome 10 has 1162 clones picked for sequencing from 23 anchored contigs; there are 3165 seed markers for one per 45 kb and 1287 frameworks (1212 placement...
Select this article
Resource: The Release 6 reference sequence of the Drosophila melanogaster genome
- Roger A. Hoskins,
- Joseph W. Carlson,
- Kenneth H. Wan,
- Soo Park,
- Ivonne Mendez,
- Samuel E. Galle,
- Benjamin W. Booth,
- Barret D. Pfeiffer,
- Reed A. George,
- Robert Svirskas,
- Martin Krzywinski,
- Jacqueline Schein,
- Maria Carmela Accardo,
- Elisabetta Damia,
- Giovanni Messina,
- María Méndez-Lago,
- Beatriz de Pablos,
- Olga V. Demakova,
- Evgeniya N. Andreyeva,
- Lidiya V. Boldyreva,
- Marco Marra,
- A. Bernardo Carvalho,
- Patrizio Dimitri,
- Alfredo Villasante,
- Igor F. Zhimulev,
- Gerald M. Rubin,
- Gary H. Karpen,
- and Susan E. Celniker
Genome Res. March 2015 25: 445-458; Published in Advance January 14, 2015, doi:10.1101/gr.185579.114
....7 Mb of finished sequences and draft sequences of a tiling path of BAC and P1 clones spanning the euchromatic portion of the (Adams et al. 2000).WGS1 and Release 1 were validated by comparison to the available finished genomic sequences and to a BAC-based physical map of the major autosomes (Hoskins et...
OPEN ACCESS ARTICLE
Select this article
Resource: Complete sequencing of a cynomolgus macaque major histocompatibility complex haplotype
- Julie A. Karl,
- Trent M. Prall,
- Hailey E. Bussan,
- Joshua M. Varghese,
- Aparna Pal,
- Roger W. Wiseman,
- and David H. O'Connor
Genome Res. March 2023 33: 448-462; Published in Advance February 28, 2023, doi:10.1101/gr.277429.122
...that contained no unknown sequence gaps and a relatively clean annotation despite the segmentally duplicated Mamu-A genes. The ∼22 kb of gaps within the MHC class I A region of Mmul_10 are near the Mamu-AG genes, indicating some uncertainty about the accuracy of the assembly in that portion of the class I...
Select this article
Resource: The genome of the vervet (Chlorocebus aethiops sabaeus)
- Wesley C. Warren,
- Anna J. Jasinska,
- Raquel García-Pérez,
- Hannes Svardal,
- Chad Tomlinson,
- Mariano Rocchi,
- Nicoletta Archidiacono,
- Oronzo Capozzi,
- Patrick Minx,
- Michael J. Montague,
- Kim Kyung,
- LaDeana W. Hillier,
- Milinn Kremitzki,
- Tina Graves,
- Colby Chiang,
- Jennifer Hughes,
- Nam Tran,
- Yu Huang,
- Vasily Ramensky,
- Oi-wa Choi,
- Yoon J. Jung,
- Christopher A. Schmitt,
- Nikoleta Juretic,
- Jessica Wasserscheid,
- Trudy R. Turner,
- Roger W. Wiseman,
- Jennifer J. Tuscher,
- Julie A. Karl,
- Jörn E. Schmitz,
- Roland Zahn,
- David H. O'Connor,
- Eugene Redmond,
- Alex Nisbett,
- Béatrice Jacquelin,
- Michaela C. Müller-Trutwin,
- Jason M. Brenchley,
- Michel Dione,
- Martin Antonio,
- Gary P. Schroth,
- Jay R. Kaplan,
- Matthew J. Jorgensen,
- Gregg W.C. Thomas,
- Matthew W. Hahn,
- Brian J. Raney,
- Bronwen Aken,
- Rishi Nag,
- Juergen Schmitz,
- Gennady Churakov,
- Angela Noll,
- Roscoe Stanyon,
- David Webb,
- Francoise Thibaud-Nissen,
- Magnus Nordborg,
- Tomas Marques-Bonet,
- Ken Dewar,
- George M. Weinstock,
- Richard K. Wilson,
- and Nelson B. Freimer
Genome Res. December 2015 25: 1921-1933; Published in Advance September 16, 2015, doi:10.1101/gr.192922.115
.../. An example of a vervet-specific fission (Fig. 2B) shows the results of a cohybridization FISH experiment, with three almost overlapping human BACs from Chromosome 5 mapping within an interval of ∼622 kb. The external BACs (RP11-450M18 and RP11-1115K14) map to CAE Chromosomes 4 and 23, respectively, while...

For checked items

view abstracts
download to citation manager

Searching journal content for articles similar to Crabtree et al. 11 (10): 1746.

Search Results

Modify Results

This search

Preprint Server

Current Issue

In This Issue

Citation format:
Results / page:
Results order: