Searching journal content for articles similar to Choo 8 (2): 81.

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  1. Corrigendum: Corrigendum: Centromere RNA is a key component for the assembly of nucleoproteins at the nucleolus and centromere
    • Lee H. Wong,
    • Kate H. Brettingham-Moore,
    • Lyn Chan,
    • Julie M. Quach,
    • Melissa A. Anderson,
    • Emma L. Northrop,
    • Ross Hannan,
    • Richard Saffery,
    • Margaret L. Shaw,
    • Evan Williams,
    • and K.H. Andy Choo
    Genome Res. June 2024 34: 979-980; doi:10.1101/gr.279693.124
    ...the conclusions of the article. The authors apologize for any confusion. Centromere RNA accumulates in the transcriptionally active nucleolus “The results with these antisera confirmed that α-satellite RNA was enriched in the nucleolus (Fig. 1A,C,D,E). Competition with tRNA and rRNA did not affect the detection...
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  2. Research: Polymorphic centromere locations in the pathogenic yeast Candida parapsilosis
    • Mihaela Ola,
    • Caoimhe E. O'Brien,
    • Aisling Y. Coughlan,
    • Qinxi Ma,
    • Paul D. Donovan,
    • Kenneth H. Wolfe,
    • and Geraldine Butler
    Genome Res. May 2020 30: 684-696; Published in Advance May 18, 2020, doi:10.1101/gr.257816.119
    ...rearrangements of the karyotype by breakage at centromeres have also been reported in the basidiomycete yeast Cryptococcus (Sun et al. 2017).There are many unanswered questions about how and why the centromere relocations in C. parapsilosis 90-137 occurred. We do not know how frequent centromere location...
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  3. Research: Centromere location in Arabidopsis is unaltered by extreme divergence in CENH3 protein sequence
    • Shamoni Maheshwari,
    • Takayoshi Ishii,
    • C. Titus Brown,
    • Andreas Houben,
    • and Luca Comai
    Genome Res. March 2017 27: 471-478; Published in Advance February 21, 2017, doi:10.1101/gr.214619.116
    ...CENH3 has evolved. Our results indicate that CENH3 binds epigenetically defined centromere domains regardless of sequence context. The remarkable positional stability of divergent CENH3 leaves us even more curious as to why these centromeres are weaker when competing with wild-type centromeres...
  4. Research: Genomic variation within alpha satellite DNA influences centromere location on human chromosomes with metastable epialleles
    • Megan E. Aldrup-MacDonald,
    • Molly E. Kuo,
    • Lori L. Sullivan,
    • Kimberline Chew,
    • and Beth A. Sullivan
    Genome Res. October 2016 26: 1301-1311; Published in Advance August 10, 2016, doi:10.1101/gr.206706.116
    ...are functionally deficient and that this has long-term consequences for overall HSA17 mitotic stability. Heterogeneous D17Z1 has reduced amounts of centromere protein A (CENPA) We wanted to understand the functional basis for why the highly variant D17Z1 centromeres were associated with HSA17 instability. We...
  5. Research: Dynamic evolution of satellite DNAs drastically differentiates the genomes of Tribolium sibling species
    • Damira Veseljak,
    • Evelin Despot-Slade,
    • Marin Volarić,
    • Lucija Horvat,
    • Tanja Vojvoda Zeljko,
    • Nevenka Meštrović,
    • and Brankica Mravinac
    Genome Res. November 2025 35: 2445-2460; Published in Advance September 16, 2025, doi:10.1101/gr.280516.125
    ...the fact that the primordial satellite still exists, it is equally intriguing why only 15% of its sequence length has evolved into the new satellite. The proliferation of a dominant satDNA from a segment of a repetitive sequence is also demonstrated by the T. castaneum major centromeric satDNA TCAST...
  6. LETTER: Centromere RNA is a key component for the assembly of nucleoproteins at the nucleolus and centromere
    • Lee H. Wong,
    • Kate H. Brettingham-Moore,
    • Lyn Chan,
    • Julie M. Quach,
    • Melissa A. Anderson,
    • Emma L. Northrop,
    • Ross Hannan,
    • Richard Saffery,
    • Margaret L. Shaw,
    • Evan Williams,
    • and K.H. Andy Choo
    Genome Res. August 2007 17: 1146-1160; Published in Advance July 10, 2007, doi:10.1101/gr.6022807
    ...Institute & Department of Paediatrics, University of Melbourne, Royal Children’s Hospital, Parkville 3052, Victoria, Australia; 2 Peter MacCallum Research Institute, St. Andrew’s Place, East Melbourne, Victoria 3002, Australia Abstract The centromere is a complex structure, the components and assembly...
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  7. Review: The structure, function, and evolution of plant centromeres
    • Matthew Naish and
    • Ian R. Henderson
    Genome Res. February 2024 34: 161-178; Published in Advance March 14, 2024, doi:10.1101/gr.278409.123
    ...Matthew Naish and Ian R. Henderson Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom Corresponding author: irh25@cam.ac.ukAbstractCentromeres are essential regions of eukaryotic chromosomes responsible for the formation of kinetochore complexes, which connect...
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  8. Research: Candida albicans isolates contain frequent heterozygous structural variants and transposable elements within genes and centromeres
    • Ursula Oggenfuss,
    • Robert T. Todd,
    • Natthapon Soisangwan,
    • Bailey Kemp,
    • Alison Guyer,
    • Annette Beach,
    • and Anna Selmecki
    Genome Res. April 2025 35: 824-838; Published in Advance October 22, 2024, doi:10.1101/gr.279301.124
    ...clinical isolate, indicating that SVs represent a significant source of intraspecies genetic variation. We identify multiple, distinct SVs at the centromeres of Chromosome 4 and Chromosome 5, including inversions and transposon polymorphisms. These two chromosomes are often aneuploid in drug...
  9. Commentary: Implications of the first complete human genome assembly Genome Res. April 2022 32: 595-598; Published in Advance March 31, 2022, doi:10.1101/gr.276723.122
    ...as ultra-long Oxford Nanopore Technologies (ONT) and Pacific Biosciences (PacBio) high-fidelity (HiFi) data, has resulted in the gapless assemblies of all 22 autosomes plus Chromosome X, including the centromeric regions, the short arms of five acrocentric human chromosomes, and almost 200 million base...
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  10. INSIGHT/OUTLOOK: What is Finished, and Why Does it Matter
    • Elaine Mardis,
    • John McPherson,
    • Robert Martienssen,
    • Richard K. Wilson,
    • and W. Richard McCombie
    Genome Res. May 1, 2002 12: 669-671; doi:10.1101/gr.032102
    ...Elaine Mardis 1 , John McPherson 1 , Robert Martienssen 2 , Richard K. Wilson 1 , and W. Richard McCombie 2 , 3 1Washington University School of Medicine, Genome Sequencing Center, St. Louis, Missouri 63108, USA; 2Cold Spring Harbor Laboratory, Woodbury, New York 11797-2924, USA. Our ability...
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