Searching journal content for articles similar to Chapman et al. 14 (2): 313.

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  1. LETTER: Long-range comparison of human and mouse Sprr loci to identify conserved noncoding sequences involved in coordinate regulation
    • Natalia Martin,
    • Satyakam Patel,
    • and Julia A. Segre
    Genome Res. December 2004 14: 2430-2438; doi:10.1101/gr.2709404
    .... 2004 . Analysis of multiple genomic sequence alignments: A web resource, online tools, and lessons learned from analysis of mammalian SCL loci. Genome Res. 14 : 313 -318. ↵ Elder, J.T. and Zhao, X. 2002 . Evidence for local control of gene expression in the epidermal differentiation complex. Exp...
  2. Methods: Identifying gene regulatory elements by genomic microarray mapping of DNaseI hypersensitive sites
    • George A. Follows,
    • Pawan Dhami,
    • Berthold Göttgens,
    • Alexander W. Bruce,
    • Peter J. Campbell,
    • Shane C. Dillon,
    • Aileen M. Smith,
    • Christoph Koch,
    • Ian J. Donaldson,
    • Mike A. Scott,
    • Ian Dunham,
    • Mary E. Janes,
    • David Vetrie,
    • and Anthony R. Green
    Genome Res. October 2006 16: 1310-1319; Published in Advance September 8, 2006, doi:10.1101/gr.5373606
    ...streptavidin beads. This template is then labeled and hybridized to genomic arrays as described in Methods. ( B ) Diagrammatic map of mouse chromosome 4 showing the organization of the three genes: Stil ( Scl/Tal1 Interrupting Locus), Tal1, and Pdzk1ip1 . In the middle panel, the direction of transcription...
  3. LETTER: Close sequence comparisons are sufficient to identify human cis-regulatory elements
    • Shyam Prabhakar,
    • Francis Poulin,
    • Malak Shoukry,
    • Veena Afzal,
    • Edward M. Rubin,
    • Olivier Couronne,
    • and Len A. Pennacchio
    Genome Res. July 2006 16: 855-863; Published in Advance June 12, 2006, doi:10.1101/gr.4717506
    ...in primate, mammalian, and more distant comparisons using a uniform approach (Gumby) that facilitates unbiased assessment of the impact of evolutionary distance on predictive power. We benchmarked computational predictions against previously identified cis -regulatory elements at diverse genomic loci...
  4. ARTICLE: Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
    • Adam Siepel,
    • Gill Bejerano,
    • Jakob S. Pedersen,
    • Angie S. Hinrichs,
    • Minmei Hou,
    • Kate Rosenbloom,
    • Hiram Clawson,
    • John Spieth,
    • LaDeana W. Hillier,
    • Stephen Richards,
    • George M. Weinstock,
    • Richard K. Wilson,
    • Richard A. Gibbs,
    • W. James Kent,
    • Webb Miller,
    • and David Haussler
    Genome Res. August 2005 15: 1034-1050; Published in Advance July 15, 2005, doi:10.1101/gr.3715005
    ...). Comparative studies suggest that mammalian s contain large numbers of functional elements that have yet to be identified and characterized. Analyses of human and rodent s ( Mouse Genome Sequencing Consortium 2002 ; Chiaromonte et al. 2003 ; Roskin et al. 2003 ; Cooper et al. 2004 ; Rat Genome Sequencing...
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