Searching journal content for articles similar to Campillos et al. 16 (3): 374.

Displaying results 1-9 of 9

For checked items

view abstracts
download to citation manager

Select this article
LETTER: Quantifying Modularity in the Evolution of Biomolecular Systems
- Berend Snel and
- Martijn A. Huynen
Genome Res. March 2004 14: 391-397; doi:10.1101/gr.1969504
...Abstract Functional modules are considered the primary building blocks of biomolecular systems. Here we study to what extent functional modules behave cohesively across genomes:That is, are functional modules also evolutionary modules? We probe this question by analyzing for a large collection...
Select this article
LETTER: Conserved Disruptions in the Predicted Coiled-Coil Domains of Eukaryotic SMC Complexes: Implications for Structure and Function
- Matthew Beasley,
- Huiling Xu,
- William Warren,
- and Michael McKay
Genome Res. August 1, 2002 12: 1201-1209; doi:10.1101/gr107302
.... , Hirano M. , Hirano T. ( 1998 ) Identification of Xenopus SMC protein complexes required for sister chromatid cohesion. Genes Dev. 12 : 1986 – 1997 . ↵ Löwe J. , Cordell S.C. , van den Ent F. ( 2001 ) Crystal structure of the SMC head domain: An ABC ATPase with 900 residues antiparallel coiled...
Select this article
Mini-Review: The chromatin tapestry as a framework for neurodevelopment
- Ben Nolan,
- Timothy E. Reznicek,
- Christopher T. Cummings,
- and M. Jordan Rowley
Genome Res. October 2024 34: 1477-1486; doi:10.1101/gr.278408.123
...the importance of measuring multiple chromatin architectural aspects, as the disruption of one mechanism can likely impact others in the intricate epigenetic network. This mini-review underscores the vast gaps in our understanding of chromatin structure in neurodevelopmental diseases and the substantial research...
OPEN ACCESS ARTICLE
Select this article
Research: Polycomb-dependent differential chromatin compartmentalization determines gene coregulation in Arabidopsis
- Ying Huang,
- Sanchari Sicar,
- Juan S. Ramirez-Prado,
- Deborah Manza-Mianza,
- Javier Antunez-Sanchez,
- Rim Brik-Chaouche,
- Natalia Y. Rodriguez-Granados,
- Jing An,
- Catherine Bergounioux,
- Magdy M. Mahfouz,
- Heribert Hirt,
- Martin Crespi,
- Lorenzo Concia,
- Fredy Barneche,
- Simon Amiard,
- Aline V. Probst,
- Jose Gutierrez-Marcos,
- Federico Ariel,
- Cécile Raynaud,
- David Latrasse,
- and Moussa Benhamed
Genome Res. July 2021 31: 1230-1244; Published in Advance June 3, 2021, doi:10.1101/gr.273771.120
...acts directly or indirectly to regulate chromatin interactions, although how this histone modification modulates 3D chromatin architecture remains elusive. To decipher the impact of the dynamic deposition of H3K27me3 on the Arabidopsis thaliana nuclear interactome, we combined genetics, transcriptomics...
Select this article
Research: Rapid reversible changes in compartments and local chromatin organization revealed by hyperosmotic shock
- Ramon Amat,
- René Böttcher,
- François Le Dily,
- Enrique Vidal,
- Javier Quilez,
- Yasmina Cuartero,
- Miguel Beato,
- Eulàlia de Nadal,
- and Francesc Posas
Genome Res. January 2019 29: 18-28; Published in Advance December 6, 2018, doi:10.1101/gr.238527.118
...for the assembly of transcriptional responses. However, how chromosome organization is dynamically modulated to permit rapid and transient transcriptional changes in response to environmental challenges remains unclear. Here we show that hyperosmotic stress disrupts different levels of chromosome organization...
OPEN ACCESS ARTICLE
Select this article
Research: A CTCF-independent role for cohesin in tissue-specific transcription
- Dominic Schmidt,
- Petra C. Schwalie,
- Caryn S. Ross-Innes,
- Antoni Hurtado,
- Gordon D. Brown,
- Jason S. Carroll,
- Paul Flicek,
- and Duncan T. Odom
Genome Res. May 2010 20: 578-588; Published in Advance March 10, 2010, doi:10.1101/gr.100479.109
..., Telling A, Amit I, Lajoie BR, Sabo PJ, Dorschner MO, et al. 2009. Comprehensive mapping of long-range interactions reveals folding principles of the human . Science 326: 289–293. Losada A, Hirano M, Hirano T. 1998. Identification of Xenopus SMC protein complexes required for sister chromatid cohesion...
OPEN ACCESS ARTICLE
Select this article
Research: Evolution of a genomic regulatory domain: The role of gene co-option and gene duplication in the Enhancer of split complex
- Elizabeth J. Duncan and
- Peter K. Dearden
Genome Res. July 2010 20: 917-928; Published in Advance May 10, 2010, doi:10.1101/gr.104794.109
.... For identification of bearded class genes, the secondary structure of the predicted protein sequence was assessed using the multivariate linear regression combination (MLRC) algorithm (Guermeur et al. 1999) at the Network Protein Sequence Analysis website (NPS) (Combet et al. 2000). The nature of predicted helical...
Select this article
Research: Genome-wide and parental allele-specific analysis of CTCF and cohesin DNA binding in mouse brain reveals a tissue-specific binding pattern and an association with imprinted differentially methylated regions
- Adam R. Prickett,
- Nikolaos Barkas,
- Ruth B. McCole,
- Siobhan Hughes,
- Samuele M. Amante,
- Reiner Schulz,
- and Rebecca J. Oakey
Genome Res. October 2013 23: 1624-1635; Published in Advance June 26, 2013, doi:10.1101/gr.150136.112
...is mechanistically diverse. [Supplemental material is available for this article.] DNA sequences that control transcription are frequently located in the noncoding portion of the mammalian (The ENCODE Project Consortium 2012). These elements can act over long distances (Noonan and McCallion 2010). The identification...
Select this article
LETTER: Centromere RNA is a key component for the assembly of nucleoproteins at the nucleolus and centromere
- Lee H. Wong,
- Kate H. Brettingham-Moore,
- Lyn Chan,
- Julie M. Quach,
- Melissa A. Anderson,
- Emma L. Northrop,
- Ross Hannan,
- Richard Saffery,
- Margaret L. Shaw,
- Evan Williams,
- and K.H. Andy Choo
Genome Res. August 2007 17: 1146-1160; Published in Advance July 10, 2007, doi:10.1101/gr.6022807
.... This structure comprises two defined domains: the central core for the assembly of the kinetochore and the flanking pericentric heterochromatin for centromere cohesion. In Schizosaccharomyces pombe , the outer centromeric repeat sequences give rise to small interfering RNAs (siRNA) that participate in chromatin...
OPEN ACCESS ARTICLE

For checked items

view abstracts
download to citation manager

Searching journal content for articles similar to Campillos et al. 16 (3): 374.

Search Results

Modify Results

This search

Preprint Server

Current Issue

In This Issue

Citation format:
Results / page:
Results order: