Searching journal content for articles similar to Caetano-Anollés et al. 4 (1): 59.

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  1. REVIEW: Amplifying DNA with arbitrary oligonucleotide primers.
    • G Caetano-Anollés
    Genome Res. October 1993 3: 85-94; doi:10.1101/gr.3.2.85
    ...-Lloyd, B.V. and Newbury. H.J. 1992 . The random amplification of polymorphic DNA for fingerprinting plants. PCR Methods Applic. 1 : 274 – 276 . 64. Blanchard, M.M., Taillon-Miller, P. Nowotny, P. and Nowotny. V. 1993 . PCR buffer optimization with uniform temperature regimen to facilitate automation. PCR...
  2. Review: A systematic guide for identifying transcription factors that directly regulate the expression of a gene of interest
    • Andrew D. Bates,
    • Dawid Grzela,
    • Maciej Studzian,
    • Louise Brennan,
    • Moli Williams,
    • Conor Fawcett,
    • Beth Hammond,
    • Manreen Grewal,
    • Marcin Ratajewski,
    • Lukasz Pulaski,
    • and Urszula L. McClurg
    Genome Res. March 2026 36: 433-459; Published in Advance February 17, 2026, doi:10.1101/gr.281154.125
    ..., hinging on the precise binding of transcription factors (TFs) and cofactors to gene regulatory elements such as promoters and enhancers. Although it is relatively routine to profile -wide DNA binding landscapes of proteins, identifying the specific proteins that bind to, and regulate the transcription of...
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  3. ARTICLE: RAPD and other PCR-based analyses of plant genomes using DNA extracted from small leaf disks.
    • J M Deragon and
    • B S Landry
    Genome Res. February 1992 1: 175-180; doi:10.1101/gr.1.3.175
    ...min. After a 15-rain centrifugation (16,000g), the DNA pel- let was washed once with 70% ethanol, dried in vacuo, and resuspended in 50 B1 of TE buffer (10 mM Tris-HC1, pH 8.0, 1 mM EDTA). Special attention should be paid to the DNA pellet be- cause pellet loss after precipitation is the main reason...
  4. RESEARCH: Strategies for Mutational Analysis of the Large Multiexon ATM Gene Using High-Density Oligonucleotide Arrays
    • Joseph G. Hacia,
    • Bryan Sun,
    • Nathaniel Hunt,
    • Keith Edgemon,
    • Deborah Mosbrook,
    • Christiane Robbins,
    • Stephen P.A. Fodor,
    • Danilo A. Tagle,
    • and Francis S. Collins
    Genome Res. December 1, 1998 8: 1245-1258; doi:10.1101/gr.8.12.1245
    ...,000oligonucleotide probes, 25 nucleotides in length, were designed to screen for all possible heterozygous germ-line mutations in the 9.17-kb coding region of the ATM gene. A strategy for rapidly developing multiexon PCR amplification protocols in DNA chip-based hybridization analysis was devised and implemented...
  5. REVIEW: Sequence-tagged site (STS) content mapping of human chromosomes: theoretical considerations and early experiences.
    • E D Green and
    • P Green
    Genome Res. November 1991 1: 77-90; doi:10.1101/gr.1.2.77
    ...., , Parik, J. , Malmgren, H. , Stewart, J. , Pettersson, U. , Landegren. U. Lagerstrom, M., Parik, J. Malmgren, H. Stewart, J. Pettersson, U. and Landegren. U. 1991 . Capture PCR: Efficient amplification of DNA fragments adjacent to a known sequence in human and YAC DNA. PCR Methods Applic. 1 : 111 – 119...
  6. RESOURCE: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
    • Gwenn M. Hansen,
    • Diane C. Markesich,
    • Michael B. Burnett,
    • Qichao Zhu,
    • Karen M. Dionne,
    • Lizabeth J. Richter,
    • Richard H. Finnell,
    • Arthur T. Sands,
    • Brian P. Zambrowicz,
    • and Alejandro Abuin
    Genome Res. October 2008 18: 1670-1679; Published in Advance September 17, 2008, doi:10.1101/gr.078352.108
    ...sequence tags (ISTs) Genomic DNA was isolated in 96-well format from confluent G418-resistant ES cell clones. Cells were rinsed twice with PBS and frozen at −80°C prior to processing. ES cell clone samples were treated with 50 μL of lysis buffer (50 mM Tris at pH 7.5, 50 mM EDTA at pH 8.0, 100 mM NaCl, 1...
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