Searching journal content for articles similar to Bowen and McDonald 11 (9): 1527.

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  1. Research: Rapid evolution of piRNA clusters in the Drosophila melanogaster ovary
    • Satyam P. Srivastav,
    • Cédric Feschotte,
    • and Andrew G. Clark
    Genome Res. May 2024 34: 711-724; Published in Advance May 15, 2024, doi:10.1101/gr.278062.123
    ...represented in Drosophila: non-LTR retrotransposons (LINEs), LTR retrotransposons (Ty1/copia; Ty3/mdg4; BEL/Pao superfamilies), Rolling Circle (RC) transposons, and cut-and-paste DNA transposons. We found that TE copies from all three LTR superfamilies are significantly younger in piCs than non-piC regions...
  2. Research: Evolution of genome structure in the Drosophila simulans species complex
    • Mahul Chakraborty,
    • Ching-Ho Chang,
    • Danielle E. Khost,
    • Jeffrey Vedanayagam,
    • Jeffrey R. Adrion,
    • Yi Liao,
    • Kristi L. Montooth,
    • Colin D. Meiklejohn,
    • Amanda M. Larracuente,
    • and J.J. Emerson
    Genome Res. March 2021 31: 380-396; Published in Advance February 9, 2021, doi:10.1101/gr.263442.120
    ...(Drosophila 12 Genomes Consortium 2007; Lerat et al. 2011; Kofler et al. 2015; Bargues and Lerat 2017). Non-LTR retrotransposons comprise the majority (52%) of the old TEs found in all four mel-complex species, whereas DNA transposons comprise most (71%) of the younger fixed TE sequences found only in the sim...
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  3. LETTER: Analyses of LTR-Retrotransposon Structures Reveal Recent and Rapid Genomic DNA Loss in Rice
    • Jianxin Ma,
    • Katrien M. Devos,
    • and Jeffrey L. Bennetzen
    Genome Res. May 2004 14: 860-869; Published in Advance April 12, 2004, doi:10.1101/gr.1466204
    .... Genomic gigantism: DNA loss is slow in mountain grasshoppers. Mol. Biol. Evol. 18 : 246 -253. ↵ Bowen, N.J. and McDonald, J.F. 2001 . Drosophila euchromatic LTR retrotransposons are much younger than the host species in which they reside. Genome Res. 11 : 1527 -1540. ↵ Costas, J. and Naveira, H. 2000...
  4. Research: Transposable element dynamics and PIWI regulation impacts lncRNA and gene expression diversity in Drosophila ovarian cell cultures
    • Yuliya A. Sytnikova,
    • Reazur Rahman,
    • Gung-wei Chirn,
    • Josef P. Clark,
    • and Nelson C. Lau
    Genome Res. December 2014 24: 1977-1990; Published in Advance September 29, 2014, doi:10.1101/gr.178129.114
    ...Transposable element dynamics and PIWI regulation impacts lncRNA and gene expression diversity in Drosophila ovarian cell cultures Yuliya A. Sytnikova 1 , Reazur Rahman 1 , Gung-wei Chirn , Josef P. Clark and Nelson C. Lau...
  5. ARTICLE: Retrotransposons and Their Recognition of pol II Promoters: A Comprehensive Survey of the Transposable Elements From the Complete Genome Sequence of Schizosaccharomyces pombe
    • Nathan J. Bowen,
    • I. King Jordan,
    • Jonathan A. Epstein,
    • Valerie Wood,
    • and Henry L. Levin
    Genome Res. September 2003 13: 1984-1997; doi:10.1101/gr.1191603
    ...into the of the host. LTR retrotransposons are also genetically similar to endogenous retroviruses in that they are integrated in the germline of their host. Therefore, LTR retrotransposons serve as excellent model systems for understanding the evolutionary impact that they and endogenous retroviruses have on the host...
  6. LETTER: Sequence Divergence Within Transposable Element Families in the Drosophila melanogaster Genome
    • Emmanuelle Lerat,
    • Carène Rizzon,
    • and Christian Biémont
    Genome Res. August 2003 13: 1889-1896; Published in Advance July 17, 2003, doi:10.1101/gr.827603
    ...and the evolution of eukaryotic complexity. Curr. Issues Mol. Biol. 4 : 65 -76. ↵ Bowen, N.J. and McDonald, J.F. 2001 . Drosophila euchromatic LTR retrotransposons are much younger than the host species in which they reside. Genome Res. 11 : 1527 -1540. ↵ Brookfield, J.F.Y. 1986 . A model of DNA sequence evolution...
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