Searching journal content for articles similar to Bochner et al. 11 (7): 1246.

Displaying results 1-10 of 19
For checked items
  1. METHODS: High-Throughput Variation Detection and Genotyping Using Microarrays
    • David J. Cutler,
    • Michael E. Zwick,
    • Minerva M. Carrasquillo,
    • Christopher T. Yohn,
    • Katherine P. Tobin,
    • Carl Kashuk,
    • Debra J. Mathews,
    • Nila A. Shah,
    • Evan E. Eichler,
    • Janet A. Warrington,
    • and Aravinda Chakravarti
    Genome Res. November 1, 2001 11: 1913-1925; Published in Advance October 15, 2001, doi:10.1101/gr.197201
    ...High-Throughput Variation Detection and Genotyping Using Microarrays David J. Cutler 1 , 4 , Michael E. Zwick 1 , Minerva M. Carrasquillo 3 , Christopher T. Yohn 1 , Katherine P. Tobin 1 , Carl Kashuk 1 , Debra J. Mathews 3...
  2. Methods: High-Throughput Selection of Effective RNAi Probes for Gene Silencing
    • Rajeev Kumar,
    • Douglas S. Conklin,
    • and Vivek Mittal
    Genome Res. October 2003 13: 2333-2340; doi:10.1101/gr.1575003
    ...effective siRNA against any gene. The efficacy of siRNA sequences is monitored by their ability to reduce the expression of cognate target-reporter fusions with easily quantified readouts. Finally, using micro array-based cell transfections, we demonstrate an unlimited potential of this approach in high-throughput...
  3. Method: Gene expression profiling of single cells from archival tissue with laser-capture microdissection and Smart-3SEQ
    • Joseph W. Foley,
    • Chunfang Zhu,
    • Philippe Jolivet,
    • Shirley X. Zhu,
    • Peipei Lu,
    • Michael J. Meaney,
    • and Robert B. West
    Genome Res. November 2019 29: 1816-1825; Published in Advance September 13, 2019, doi:10.1101/gr.234807.118
    ...macrophages and single ductal cells inferred to be macrophages (Supplemental File 3). Many of the most significant genes are related to extracellular matrix interactions and leukocyte signaling. These data raise the possibility that intraductal macrophages have a phenotype that is distinct from stromal...
    OPEN ACCESS ARTICLE
  4. Research: Genome-scale RNAi on living-cell microarrays identifies novel regulators of Drosophila melanogaster TORC1–S6K pathway signaling
    • Robert A. Lindquist,
    • Kathleen A. Ottina,
    • Douglas B. Wheeler,
    • Peggy P. Hsu,
    • Carson C. Thoreen,
    • David A. Guertin,
    • Siraj M. Ali,
    • Shomit Sengupta,
    • Yoav D. Shaul,
    • Michael R. Lamprecht,
    • Katherine L. Madden,
    • Adam R. Papallo,
    • Thouis R. Jones,
    • David M. Sabatini,
    • and Anne E. Carpenter
    Genome Res. March 2011 21: 433-446; Published in Advance January 14, 2011, doi:10.1101/gr.111492.110
    ...genes as significant on-target regulators of RPS6 phosphorylation, and we characterized them with extensive secondary assays probing various arms of the TORC1 pathways, identifying functional relationships among those genes. We conclude that cell-based microarrays are a useful platform for genome...
  5. METHODS: Rapid Mapping of Zebrafish Mutations With SNPs and Oligonucleotide Microarrays
    • Heather L. Stickney,
    • Jeremy Schmutz,
    • Ian G. Woods,
    • Caleb C. Holtzer,
    • Mark C. Dickson,
    • Peter D. Kelly,
    • Richard M. Myers,
    • and William S. Talbot
    Genome Res. December 1, 2002 12: 1929-1934; doi:10.1101/gr.777302
    ...) Oligonucleotide arrays for high-throughput SNPs detection in the MHC class I genes: HLA-B as a model system. Genome Res. 12 : 447 – 457 . ↵ Hacia J.G. , Fan J.B. , Ryder O. , Jin L. , Edgemon K. , Ghandour G. , Mayer R.A. , Sun B. , Hsie L. , Robbins C.M. , et al. ( 1999 ) Determination of ancestral alleles...
  6. METHODS: High-Density Cell Microarrays for Parallel Functional Determinations
    • C. Wilson Xu
    Genome Res. March 1, 2002 12: 482-486; Published in Advance February 15, 2002, doi:10.1101/gr.213002
    ...deletion strains could be arrayed on the permeable membrane within an area of ∼6 cm2. Such cell microarrays would allow high-throughput phenotypic assays (e.g., cell shape, budding pattern, and drug resistance) of gene activities under a variety of conditions. Therefore, cell microarrays should complement...
  7. REVIEW: Automation for Genomics, Part Two: Sequencers, Microarrays, and Future Trends
    • Deirdre Meldrum
    Genome Res. September 1, 2000 10: 1288-1303; doi:10.1101/gr.157400
    .... The microarray platform is in a 96-well customizable format for medium-density and high-throughput and up to 250 genes/array ( Lamture et al. 1994 ). In September 1999, Genometrix and Motorola, Inc. agreed to a coexclusive rights agreement to use and commercialize proprietary Genometix electronic DNA chip...
  8. METHODS: Y-Chromosomal SNPs in Finno–Ugric-Speaking Populations Analyzed by Minisequencing on Microarrays
    • Mirja Raitio,
    • Katarina Lindroos,
    • Minna Laukkanen,
    • Tomi Pastinen,
    • Pertti Sistonen,
    • Antti Sajantila,
    • and Ann-Christine Syvänen
    Genome Res. March 1, 2001 11: 471-482; doi:10.1101/gr.156301
    ...-based multiplex analysis of candidate genes reveals two independent and additive genetic risk factors for myocardial infarction in the Finnish population. Hum. Mol. Genet. 7 : 1453 – 1462 . ↵ Pastinen T. , Raitio M. , Lindroos K. , Tainola P. , Peltonen L. , Syvänen A.-C. ( 2000 ) A system for specific, high-throughput...
  9. Resource: A spatial and temporal map of C. elegans gene expression
    • W. Clay Spencer,
    • Georg Zeller,
    • Joseph D. Watson,
    • Stefan R. Henz,
    • Kathie L. Watkins,
    • Rebecca D. McWhirter,
    • Sarah Petersen,
    • Vipin T. Sreedharan,
    • Christian Widmer,
    • Jeanyoung Jo,
    • Valerie Reinke,
    • Lisa Petrella,
    • Susan Strome,
    • Stephen E. Von Stetina,
    • Menachem Katz,
    • Shai Shaham,
    • Gunnar Rätsch,
    • and David M. Miller III
    Genome Res. February 2011 21: 325-341; Published in Advance December 22, 2010, doi:10.1101/gr.114595.110
    ...A spatial and temporal map of C. elegans gene expression W. Clay Spencer 1 , 7 , Georg Zeller 2 , 3 , 7 , 8 , Joseph D. Watson 1 , 9 , Stefan R. Henz 3 , Kathie L. Watkins 1 , Rebecca D. McWhirter 1 , Sarah Petersen...
    OPEN ACCESS ARTICLE
  10. Methods: Identifying gene regulatory elements by genomic microarray mapping of DNaseI hypersensitive sites
    • George A. Follows,
    • Pawan Dhami,
    • Berthold Göttgens,
    • Alexander W. Bruce,
    • Peter J. Campbell,
    • Shane C. Dillon,
    • Aileen M. Smith,
    • Christoph Koch,
    • Ian J. Donaldson,
    • Mike A. Scott,
    • Ian Dunham,
    • Mary E. Janes,
    • David Vetrie,
    • and Anthony R. Green
    Genome Res. October 2006 16: 1310-1319; Published in Advance September 8, 2006, doi:10.1101/gr.5373606
    ...is available from the authors on request. Transfection experiments PCR was used to amplify regions corresponding to 680 bp of +29 and 370 bp of +32. These fragments were cloned upstream of the luciferase reporter gene in pGL2 basic (Promega) and assayed in transfection assays. Primer sequences are available...
For checked items

Search Results

Next 9 » New Search

Modify Results

Citation format:
Results / page:
Results order:

This search

  • Alert me when new articles matching this search are published
  • Download all citations on this page to my citation manager

Preprint Server



Current Issue

  1. April 2026, 36 (4)
  1. Current Issue
  1. Alert me to new issues of Genome Research