Searching journal content for articles similar to Björnerfeldt et al. 16 (8): 990.

Displaying results 1-6 of 6

For checked items

view abstracts
download to citation manager

Select this article
Research: Convergent relaxation of molecular constraint in herbivores reveals the changing role of liver and kidney functions across mammalian diets
- Matthew D. Pollard,
- Wynn K. Meyer,
- and Emily E. Puckett
Genome Res. December 2024 34: 2176-2189; Published in Advance November 22, 2024, doi:10.1101/gr.278930.124
...for DNA repair mechanisms in carnivores has been attributed to increased consumption of heme-related reactive oxygen species (Kim et al. 2016). Decreased heme-related disease risk may drive the observed pattern of relaxed evolutionary constraint as lineages become increasingly herbivorous...
Select this article
Letter: Relaxation of selective constraints on avian mitochondrial DNA following the degeneration of flight ability
- Yong-Yi Shen,
- Peng Shi,
- Yan-Bo Sun,
- and Ya-Ping Zhang
Genome Res. October 2009 19: 1760-1765; Published in Advance July 17, 2009, doi:10.1101/gr.093138.109
...J. 1995. The moment of inertia of bird wings and the inertial power requirement for flapping flight. J Exp Biol 198: 1655–1664. Bjornerfeldt S, Webster MT, Vila C. 2006. Relaxation of selective constraint on dog mitochondrial DNA following domestication. Genome Res 16: 990–994. Brown MD, Trounce IA...
Select this article
LETTER: Pseudogenes in the ENCODE regions: Consensus annotation, analysis of transcription, and evolution
- Deyou Zheng,
- Adam Frankish,
- Robert Baertsch,
- Philipp Kapranov,
- Alexandre Reymond,
- Siew Woh Choo,
- Yontao Lu,
- France Denoeud,
- Stylianos E. Antonarakis,
- Michael Snyder,
- Yijun Ruan,
- Chia-Lin Wei,
- Thomas R. Gingeras,
- Roderic Guigó,
- Jennifer Harrow,
- and Mark B. Gerstein
Genome Res. June 2007 17: 839-851; doi:10.1101/gr.5586307
...to that of neutrally evolving DNA. The nucleotide sequence identity between human pseudogenes and their orthologs indicates apparently that the majority of pseudogenes experience no evolutionary constraints, as their sequence decay pattern is not much different from that derived from fourfold degenerative sites...
OPEN ACCESS ARTICLE
Select this article
Research: Evolutionary conservation of Y Chromosome ampliconic gene families despite extensive structural variation
- Wesley A. Brashear,
- Terje Raudsepp,
- and William J. Murphy
Genome Res. December 2018 28: 1841-1851; Published in Advance October 31, 2018, doi:10.1101/gr.237586.118
...-linked components.Murphy et al. (2006) used direct cDNA selection and fluorescence in situ hybridization (FISH) to identify four novel gene families within the ampliconic region of the domestic cat MSY, all of which exhibited testis-specific expression. These gene families included two that appeared to be unique...
Select this article
LETTER: Pervasive positive selection on duplicated and nonduplicated vertebrate protein coding genes
- Romain A. Studer,
- Simon Penel,
- Laurent Duret,
- and Marc Robinson-Rechavi
Genome Res. September 2008 18: 1393-1402; Published in Advance June 18, 2008, doi:10.1101/gr.076992.108
...(e.g., from duplications basic to vertebrates). We removed species with low coverage. The restricted alignments were refined with MUSCLE ( Edgar 2004 ). Computations were then done on the new alignment, after removing all columns with at least one gap. DNA alignments are calculated from the protein...
OPEN ACCESS ARTICLE
Select this article
Resource: Assemblathon 1: A competitive assessment of de novo short read assembly methods
- Dent Earl,
- Keith Bradnam,
- John St. John,
- Aaron Darling,
- Dawei Lin,
- Joseph Fass,
- Hung On Ken Yu,
- Vince Buffalo,
- Daniel R. Zerbino,
- Mark Diekhans,
- Ngan Nguyen,
- Pramila Nuwantha Ariyaratne,
- Wing-Kin Sung,
- Zemin Ning,
- Matthias Haimel,
- Jared T. Simpson,
- Nuno A. Fonseca,
- İnanç Birol,
- T. Roderick Docking,
- Isaac Y. Ho,
- Daniel S. Rokhsar,
- Rayan Chikhi,
- Dominique Lavenier,
- Guillaume Chapuis,
- Delphine Naquin,
- Nicolas Maillet,
- Michael C. Schatz,
- David R. Kelley,
- Adam M. Phillippy,
- Sergey Koren,
- Shiaw-Pyng Yang,
- Wei Wu,
- Wen-Chi Chou,
- Anuj Srivastava,
- Timothy I. Shaw,
- J. Graham Ruby,
- Peter Skewes-Cox,
- Miguel Betegon,
- Michelle T. Dimon,
- Victor Solovyev,
- Igor Seledtsov,
- Petr Kosarev,
- Denis Vorobyev,
- Ricardo Ramirez-Gonzalez,
- Richard Leggett,
- Dan MacLean,
- Fangfang Xia,
- Ruibang Luo,
- Zhenyu Li,
- Yinlong Xie,
- Binghang Liu,
- Sante Gnerre,
- Iain MacCallum,
- Dariusz Przybylski,
- Filipe J. Ribeiro,
- Shuangye Yin,
- Ted Sharpe,
- Giles Hall,
- Paul J. Kersey,
- Richard Durbin,
- Shaun D. Jackman,
- Jarrod A. Chapman,
- Xiaoqiu Huang,
- Joseph L. DeRisi,
- Mario Caccamo,
- Yingrui Li,
- David B. Jaffe,
- Richard E. Green,
- David Haussler,
- Ian Korf,
- and Benedict Paten
Genome Res. December 2011 21: 2224-2241; Published in Advance September 16, 2011, doi:10.1101/gr.126599.111
...suite of evolution tools. Evolver simulates the forward evolution of multichromosome haploid s and includes models for evolutionary constraint, protein codons, genes, and mobile elements. The input for the simulation, termed the root , was constructed by downloading the DNA sequence and annotations (see...
OPEN ACCESS ARTICLE

For checked items

view abstracts
download to citation manager

Searching journal content for articles similar to Björnerfeldt et al. 16 (8): 990.

Search Results

Modify Results

This search

Preprint Server

Current Issue

In This Issue

Citation format:
Results / page:
Results order: