Searching journal content for articles similar to Bi et al. 27 (7): 1162.

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  1. Research: Polycomb-dependent differential chromatin compartmentalization determines gene coregulation in Arabidopsis
    • Ying Huang,
    • Sanchari Sicar,
    • Juan S. Ramirez-Prado,
    • Deborah Manza-Mianza,
    • Javier Antunez-Sanchez,
    • Rim Brik-Chaouche,
    • Natalia Y. Rodriguez-Granados,
    • Jing An,
    • Catherine Bergounioux,
    • Magdy M. Mahfouz,
    • Heribert Hirt,
    • Martin Crespi,
    • Lorenzo Concia,
    • Fredy Barneche,
    • Simon Amiard,
    • Aline V. Probst,
    • Jose Gutierrez-Marcos,
    • Federico Ariel,
    • Cécile Raynaud,
    • David Latrasse,
    • and Moussa Benhamed
    Genome Res. July 2021 31: 1230-1244; Published in Advance June 3, 2021, doi:10.1101/gr.273771.120
    ...ChIP enriched regions.Shoot and root nuclei display distinct 3D chromatin architecturesThe 3D configuration of the nuclear is nonrandom and correlates with cell type–specific transcriptomes; however, the mechanisms implicated in the establishment of this configuration are poorly understood in plants. It has...
  2. Perspective: Epigenomics and the structure of the living genome
    • Nir Friedman and
    • Oliver J. Rando
    Genome Res. October 2015 25: 1482-1490; doi:10.1101/gr.190165.115
    ...of repressive chromatin termed lamina-associated domains (LADs) are intimately associated with the nuclear periphery in many organisms (Pickersgill et al. 2006). LADs are dynamic during development, with changes in lamina association being correlated with gene repression. Perhaps the most dramatic perturbation...
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  3. Research: Characterization and dynamics of pericentromere-associated domains in mice
    • Patrick J. Wijchers,
    • Geert Geeven,
    • Michael Eyres,
    • Atze J. Bergsma,
    • Mark Janssen,
    • Marjon Verstegen,
    • Yun Zhu,
    • Yori Schell,
    • Carlo Vermeulen,
    • Elzo de Wit,
    • and Wouter de Laat
    Genome Res. July 2015 25: 958-969; Published in Advance April 16, 2015, doi:10.1101/gr.186643.114
    ...cells, but during lineage commitment, chromocenters progressively associate with constitutively inactive genomic regions at the nuclear periphery. This suggests that PADs are not actively recruited to chromocenters, but that chromocenters are themselves attracted to inactive chromatin compartments...
    OPEN ACCESS ARTICLE
  4. Research: Two contrasting classes of nucleolus-associated domains in mouse fibroblast heterochromatin
    • Anastassiia Vertii,
    • Jianhong Ou,
    • Jun Yu,
    • Aimin Yan,
    • Hervé Pagès,
    • Haibo Liu,
    • Lihua Julie Zhu,
    • and Paul D. Kaufman
    Genome Res. August 2019 29: 1235-1249; Published in Advance June 14, 2019, doi:10.1101/gr.247072.118
    ...cell nuclei, genomic loci are distributed in three-dimensional space in a nonrandom manner. In particular, heterochromatic regions frequently reside at the nuclear lamina (NL) and/or in the perinucleolar region (Németh et al. 2010; van Koningsbruggen et al. 2010; Kind et al. 2013, 2015; Ragoczy et al...
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