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  1. ..., H., and Long, M. 2004. Sex chromosomes and male functions: Where do new genes go? Cell Cycle 3: 873–875. Bhutkar, A., Russo, S.M., Smith, T.F., and Gelbart, W.M. 2007. Genome-scale analysis of positionally relocated genes. Genome Res. 17: 1880–1887. Bhutkar, A., Schaeffer, S.W., Russo, S.M., Xu, M...
  2. ...patterns and monitored on a genomic scale. Since formaldehyde reacts rapidly, high temporal resolution is achieved, for example, in response to the instantaneous exposure to nonlethal heat stress. Thus, temporal and spatial organization of regulatory events in a is visible in the ChIP-exo assay.The types...
  3. ...in the Drosophila yakuba/Drosophila erecta clade. Genetics 176: 1131. Betran E, Thornton K, Long M. 2002. Retroposed new genes out of the X in Drosophila. Genome Res 12: 1854–1859. Bhutkar A, Russo SM, Smith TF, Gelbart WM. 2007. Genome-scale analysis of positionally relocated genes. Genome Res 17: 1880...
  4. ...is not artifactual fuzziness associated with randomly distributed contaminating DNA (Supplemental Fig. S5). Thus, the positional relationship of the +1 nucleosome to the TSS may be of fundamental importance to genes, to the point where “displaced” nucleosomes are positionally unstable. Our nucleosome map reports...
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