Searching journal content for articles similar to Beagan et al. 27 (7): 1139.

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  1. Mini-Review: The chromatin tapestry as a framework for neurodevelopment
    • Ben Nolan,
    • Timothy E. Reznicek,
    • Christopher T. Cummings,
    • and M. Jordan Rowley
    Genome Res. October 2024 34: 1477-1486; doi:10.1101/gr.278408.123
    ...the complexity of chromatin organization and the nuanced differences in how genomic elements interact within the nucleus (Hyle et al. 2019; Szczepińska et al. 2021; Chakraborty et al. 2023; Spracklin et al. 2023).CTCF/cohesin loopsIn addition to compartments, advancements in -wide chromatin contact mapping have...
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  2. Research: Epstein–Barr virus nuclear antigen 2 extensively rewires the human chromatin landscape at autoimmune risk loci
    • Ted Hong,
    • Sreeja Parameswaran,
    • Omer A. Donmez,
    • Daniel Miller,
    • Carmy Forney,
    • Michael Lape,
    • Mariana Saint Just Ribeiro,
    • Jun Liang,
    • Lee E. Edsall,
    • Albert F. Magnusen,
    • William Miller,
    • Iouri Chepelev,
    • John B. Harley,
    • Bo Zhao,
    • Leah C. Kottyan,
    • and Matthew T. Weirauch
    Genome Res. December 2021 31: 2185-2198; Published in Advance November 19, 2021, doi:10.1101/gr.264705.120
    ...2019). Some regulatory proteins, such as the pioneer factor EBF1, are capable of directly altering the chromatin landscape. Other TFs, such as YY1 and CTCF, can affect the three-dimensional structure of chromatin by facilitating the formation of novel chromatin loops that alter gene transcription...
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  3. Research: Widespread plasticity in CTCF occupancy linked to DNA methylation
    • Hao Wang,
    • Matthew T. Maurano,
    • Hongzhu Qu,
    • Katherine E. Varley,
    • Jason Gertz,
    • Florencia Pauli,
    • Kristen Lee,
    • Theresa Canfield,
    • Molly Weaver,
    • Richard Sandstrom,
    • Robert E. Thurman,
    • Rajinder Kaul,
    • Richard M. Myers,
    • and John A. Stamatoyannopoulos
    Genome Res. September 2012 22: 1680-1688; doi:10.1101/gr.136101.111
    ..., Robinson AF, Loukinov D, Vatolin S, Pack S, Mackay A, Harris RA, et al. 2005. Heightened expression of CTCF in breast cancer cells is associated with resistance to apoptosis. Cancer Res 65: 5112–5122. Donohoe ME, Zhang L-F, Xu N, Shi Y, Lee JT. 2007. Identification of a Ctcf cofactor, Yy1, for the X...
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