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Bardenheuer et al. 6 (3): 176
.
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RESOURCE
:
Construction of a BAC Contig Map of Chromosome 16q by Two-Dimensional Overgo Hybridization
Cliff S. Han
,
Robert D. Sutherland
,
Phillip B. Jewett
,
Mary L. Campbell
,
Linda J. Meincke
,
Judy G. Tesmer
,
Mark O. Mundt
,
John J. Fawcett
,
Ung-Jin Kim
,
Larry L. Deaven
,
and
Norman A. Doggett
Genome Res.
May 1, 2000
10
:
714
-
721
;
doi:
10.1101/gr.10.5.714
..., California Institute of Technology, Pasadena, California 91125 USA Abstract We have used sequence-based markers from an integrated
YAC
STS-content/somatic cell hybrid breakpoint physical map and radiation hybrid maps of human
chromosome
16 to
construct
a new sequence-ready BAC map of the long arm...
Abstract
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ARTICLES
:
Long-range mapping and construction of a YAC contig within the cat eye syndrome critical region.
H E McDermid
,
K E McTaggart
,
M A Riazi
,
T J Hudson
,
M L Budarf
,
B S Emanuel
,
and
C J Bell
Genome Res.
December 1996
6
:
1149
-
1159
;
doi:
10.1101/gr.6.12.1149
....P. and Nordenskjold. M. 1994 . Identification, characterization and clinical applications of cosmids from the telomeric and centromeric regions of the long arm of
chromosome
22. Hum. Genet. 94 : 339 – 345 . RESEARCH Long-range Mapping and
Construction
of a
YAC
Contig
within the Cat Eye Syndrome Critical Region...
Abstract
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ARTICLE
:
Construction of a YAC contig encompassing the Usher syndrome type 1C and familial hyperinsulinism loci on chromosome 11p14-15.1.
R Ayyagari
,
A Nestorowicz
,
Y Li
,
S Chandrasekharappa
,
C Chinault
,
P van Tuinen
,
R J Smith
,
J F Hejtmancik
,
and
M A Permutt
Genome Res.
June 1996
6
:
504
-
514
;
doi:
10.1101/gr.6.6.504
...
Construction
of a
YAC
contig
encompassing the Usher syndrome type 1C and familial hyperinsulinism loci on
chromosome
11p14-15.1. R Ayyagari , A Nestorowicz , Y Li , S Chandrasekharappa , C Chinault , P van Tuinen , R J Smith...
Abstract
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RESEARCH
:
A Physical Map of Human Chromosome 7: An Integrated YAC Contig Map with Average STS Spacing of 79 kb
Gerard G. Bouffard
,
Jacquelyn R. Idol
,
Valerie V. Braden
,
Leslie M. Iyer
,
Aimee F. Cunningham
,
Lauren A. Weintraub
,
Jeffrey W. Touchman
,
Rose M. Mohr-Tidwell
,
Dale C. Peluso
,
Robert S. Fulton
,
Melinda S. Ueltzen
,
Jean Weissenbach
,
Charles L. Magness
,
and
Eric D. Green
Genome Res.
July 1, 1997
7
:
673
-
692
;
doi:
10.1101/gr.7.7.673
..., with the
construction
of 22 well-positioned
YAC
contigs
that together account for virtually all of the
chromosome
(Table 1 ). Supplementing this paper is more detailed information that can be accessed electronically on the World Wide Web (Table 2 ). Below are descriptions of the key aspects of our maps...
Abstract
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ARTICLE
:
Generation of a high-resolution genetic map and a YAC contig of the Lurcher locus on mouse chromosome 6.
J Zuo
,
P L De Jager
,
D J Norman
,
and
N Heintz
Genome Res.
November 1995
5
:
381
-
392
;
doi:
10.1101/gr.5.4.381
...by screening a
YAC
library and characterizing
YAC
end sequences for further screening. This effort has resulted in the
construction
of a
YAC
contig
consisting
of 14
YACs
and spanning a 3-Mb region. Markers isolated from these
YACs
were used to further define the Lc locus, resulting in a physical map...
Abstract
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References
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ARTICLE
:
The region surrounding the PKD1 gene: a 700-kb P1 contig from a YAC-deficient interval.
W R Dackowski
,
T D Connors
,
A E Bowe
,
V Stanton
,
D Housman
,
N A Doggett
,
G M Landes
,
and
K W Klinger
Genome Res.
June 1996
6
:
515
-
524
;
doi:
10.1101/gr.6.6.515
...development of high- density genetic maps based on polymorphic simple sequence repeats has facilitated
contig
as- sembly using sequence-tagged site (STS) content mapping. Most
contig
construction
efforts have relied on yeast artificial
chromosomes
(
YACs
), be- cause their large insert size uses the current STS...
Abstract
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References
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RESOURCE
:
Advanced Integrated Mouse YAC Map Including BAC Framework
Leonard C. Schalkwyk
,
Brian Cusack
,
Ilona Dunkel
,
Martina Hopp
,
Markus Kramer
,
Stefanie Palczewski
,
Jutta Piefke
,
Sabine Scheel
,
Michael Weiher
,
Gunther Wenske
,
Hans Lehrach
,
and
Heinz Himmelbauer
Genome Res.
December 1, 2001
11
:
2142
-
2150
;
doi:
10.1101/gr.176201
...efficient first step is isolating
YAC
(Yeast Artificial
Chromosome
) clones. A robust, detailed
YAC
contig
map is thus an important tool. Employing Interspersed Repetitive Sequence (IRS)-PCR genomics, we have generated an advanced second-generation
YAC
contig
map of the mouse genome that doubles both...
Abstract
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ARTICLES
:
An integrated YAC map of the human X chromosome.
H Roest Crollius
,
M T Ross
,
A Grigoriev
,
C J Knights
,
E Holloway
,
J Misfud
,
K Li
,
M Playford
,
S G Gregory
,
S J Humphray
,
A J Coffey
,
C G See
,
S Marsh
,
R Vatcheva
,
J Kumlien
,
T Labella
,
V Lam
,
K H Rak
,
K Todd
,
R Mott
,
D Graeser
,
G Rappold
,
G Zehetner
,
A Poustka
,
and
H Lehrach
Genome Res.
October 1996
6
:
943
-
955
;
doi:
10.1101/gr.6.10.943
...has been derived from our Reference Library Database and a variety of other public sources. We have
constructed
a
YAC
contig
map of the X
chromosome
covering 125 Mb of DNA in 25
contigs
and containing 906
YAC
clones. These
contigs
have been verified extensively by FISH and by gel and hybridization...
Abstract
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GENOME METHODS
:
Vector–Hexamer PCR Isolation of All Insert Ends from a YAC Contig of the Mouse
Igh
Locus
Christopher D. Herring
,
Christophe Chevillard
,
Sean L. Johnston
,
Peter J. Wettstein
,
and
Roy Riblet
Genome Res.
June 1, 1998
8
:
673
-
681
;
doi:
10.1101/gr.8.6.673
...to build physical maps are large genomic insert libraries in yeast and bacterial artificial
chromosome
vectors (
YACs
and BACs, respectively) ( Burke et al. 1987 ; Shizuya et al. 1992 ). Such libraries
consist
of multiple equivalents in tens of thousands of clones. To begin the
construction
of the physical...
Abstract
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LETTER
:
Integrated YAC Contig Map of the Prader–Willi/Angelman Region on Chromosome 15q11–q13 with Average STS Spacing of 35 kb
Susan L. Christian
,
Nehal K. Bhatt
,
Scott A. Martin
,
James S. Sutcliffe
,
Takeo Kubota
,
Bing Huang
,
Apiwat Mutirangura
,
A. Craig Chinault
,
Arthur L. Beaudet
,
and
David H. Ledbetter
Genome Res.
February 1, 1998
8
:
146
-
157
;
doi:
10.1101/gr.8.2.146
...presented here indicate the marker order as S128-S122-S156,
consistent
with the genetic map. The first 26 STSs on the most proximal
contig
for
chromosome
15, WC 15.0 ( Hudson et al. 1995 ), have been placed on this
YAC
contig
. The Whitehead
contig
does not contain the most proximal region from D15S1239 to D...
Abstract
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