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  1. .... ( 2002 ) A complete sequence of the T. tengcongensis . Genome Res. 12 : 689 – 700 . ↵ Bapteste, E. , Boucher, Y. , Leigh, J. , Doolittle, W.F. ( 2004 ) Phylogenetic reconstruction and lateral gene transfer . Trends Microbiol. 12 : 406 – 411 . ↵ Calogero, S. , Gardan, R. , Glaser, P. , Schweizer, J...
  2. ...structural domains within fully sequenced prokaryotic genomes. The evolution of the structural domains we use has been studied extensively, allowing us to base our phylogenetic methods on testable theoretical models of structural evolution. We find that the methods that produce reasonable phylogenetic...
  3. ...greater amounts of conserved regulatory sequences than do individually transcribed genes. Footnotes [Supplemental material is available online at www.genome.org.] Article and publication are at http://www.genome.org/cgi/doi/10.1101/gr.3368805. Freely available online through...
  4. ...., Chen, Y., Xue, Y., et al. 2002 . A complete sequence of the T. tengcongensis . Genome Res. 12 : 689 -700. ↵ Borges, K.M., Brummet, S.R., Bogert, A., Davis, M.C., Hujer, K.M., Domke, S.T., Szasz, J., Ravell, J., DiRuggiero, J., Fuller, C., et al. 1996 . A survey of the of the hyperthermophilic archaeon...
  5. ...An Appraisal of the Potential for Illegitimate Recombination in Bacterial Genomes and Its Consequences: From Duplications to Genome Reduction Eduardo P.C. Rocha 1 , 2 1 Unité Génétique des Génomes Bactériens, Institut Pasteur, 75724 Paris Cedex 15, France...
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