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Research: Meta-analyses of studies of the human microbiota
- Catherine A. Lozupone,
- Jesse Stombaugh,
- Antonio Gonzalez,
- Gail Ackermann,
- Doug Wendel,
- Yoshiki Vázquez-Baeza,
- Janet K. Jansson,
- Jeffrey I. Gordon,
- and Rob Knight
Genome Res. October 2013 23: 1704-1714; Published in Advance July 16, 2013, doi:10.1101/gr.151803.112
.....org Meta-analyses of studies of the human microbiota Lozupone C, Lladser ME, Knights D, Stombaugh J, Knight R. 2011. UniFrac: An effective distancemetric formicrobial community comparison. ISME J 5: 169–172. Lozupone C, Faust K, Raes J, Faith JJ, Frank DN, Zaneveld J, Gordon JI, Knight R. 2012a...
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Resource: Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
- Brian J. Haas,
- Dirk Gevers,
- Ashlee M. Earl,
- Mike Feldgarden,
- Doyle V. Ward,
- Georgia Giannoukos,
- Dawn Ciulla,
- Diana Tabbaa,
- Sarah K. Highlander,
- Erica Sodergren,
- Barbara Methé,
- Todd Z. DeSantis,
- The Human Microbiome Consortium,
- Joseph F. Petrosino,
- Rob Knight,
- and Bruce W. Birren
Genome Res. March 2011 21: 494-504; Published in Advance January 6, 2011, doi:10.1101/gr.112730.110
...Ciulla 1 , Diana Tabbaa 1 , Sarah K. Highlander 2 , 3 , Erica Sodergren 4 , Barbara Methé 5 , Todd Z. DeSantis 6 , The Human Microbiome Consortium , Joseph F. Petrosino 2 , 3 , Rob Knight 7 , 8 and Bruce W...
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LETTER: Principles of transcriptional regulation and evolution of the metabolic system in E. coli
- Aswin S.N. Seshasayee,
- Gillian M. Fraser,
- M. Madan Babu,
- and Nicholas M. Luscombe
Genome Res. January 2009 19: 79-91; Published in Advance October 3, 2008, doi:10.1101/gr.079715.108
...conditions from the M3D database ( Faith et al. 2007 ); and protein sequences for E. coli K12 MG1655 and 380 other prokaryotic organisms with completely sequenced s obtained from the KEGG database ( Kanehisa et al. 2006 ). The first four data sets contain information for E. coli K12 only. Global regulation...

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