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Z Wang
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36
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:
Multitissue single-nucleus RNA-seq reveals cell type–specific regulatory patterns of alternative polyadenylation in pigs
Qiuhan Wen
,
Zhen Wang
,
Qi Bao
,
Tianli Ding
,
Haihan Zhang
,
Jianbo Li
,
Zhuang Liu
,
Jieping Huang
,
and
Guoqiang Yi
Genome Res.
September 2025
35
:
2116
-
2129
;
Published in Advance
June 16, 2025
,
doi:
10.1101/gr.280095.124
Abstract
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Research
:
The Chinese longsnout catfish genome provides novel insights into the feeding preference and corresponding metabolic strategy of carnivores
Yulong Liu
,
Gang Zhai
,
Jingzhi Su
,
Yulong Gong
,
Bingyuan Yang
,
Qisheng Lu
,
Longwei Xi
,
Yutong Zheng
,
Jingyue Cao
,
Haokun Liu
,
Junyan Jin
,
Zhimin Zhang
,
Yunxia Yang
,
Xiaoming Zhu
,
Zhongwei Wang
,
Gaorui Gong
,
Jie Mei
,
Zhan Yin
,
Rodolphe E. Gozlan
,
Shouqi Xie
,
and
Dong Han
Genome Res.
July 2024
34
:
981
-
996
;
Published in Advance
August 9, 2024
,
doi:
10.1101/gr.278476.123
Abstract
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Method
:
A new framework for exploratory network mediator analysis in omics data
Qingpo Cai
,
Yinghao Fu
,
Cheng Lyu
,
Zihe Wang
,
Shun Rao
,
Jessica A. Alvarez
,
Yun Bai
,
Jian Kang
,
and
Tianwei Yu
Genome Res.
April 2024
34
:
642
-
654
;
Published in Advance
May 7, 2024
,
doi:
10.1101/gr.278684.123
Abstract
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Method
:
Power-law behavior of transcriptional bursting regulated by enhancer–promoter communication
Zihao Wang
,
Zhenquan Zhang
,
Songhao Luo
,
Tianshou Zhou
,
and
Jiajun Zhang
Genome Res.
January 2024
34
:
106
-
118
;
Published in Advance
January 3, 2024
,
doi:
10.1101/gr.278631.123
Abstract
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Method
:
Allele-specific RNA
N
6
-methyladenosine modifications reveal functional genetic variants in human tissues
Shuo Cao
,
Haoran Zhu
,
Jinru Cui
,
Sun Liu
,
Yuhe Li
,
Junfang Shi
,
Junyuan Mo
,
Zihan Wang
,
Hailan Wang
,
Jiaxin Hu
,
Lizhi Chen
,
Yuan Li
,
Laixin Xia
,
and
Shan Xiao
Genome Res.
August 2023
33
:
1369
-
1380
;
Published in Advance
September 15, 2023
,
doi:
10.1101/gr.277704.123
Abstract
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:
A new emu genome illuminates the evolution of genome configuration and nuclear architecture of avian chromosomes
Jing Liu
,
Zongji Wang
,
Jing Li
,
Luohao Xu
,
Jiaqi Liu
,
Shaohong Feng
,
Chunxue Guo
,
Shengchan Chen
,
Zhanjun Ren
,
Jinpeng Rao
,
Kai Wei
,
Yuezhou Chen
,
Erich D. Jarvis
,
Guojie Zhang
,
and
Qi Zhou
Genome Res.
March 2021
31
:
497
-
511
;
Published in Advance
January 6, 2021
,
doi:
10.1101/gr.271569.120
Abstract
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Research
:
Panoramic transcriptome analysis and functional screening of long noncoding RNAs in mouse spermatogenesis
Kai Li
,
Jiayue Xu
,
Yanyun Luo
,
Dingfeng Zou
,
Ruiqin Han
,
Shunshun Zhong
,
Qing Zhao
,
Xinyu Mang
,
Mengzhen Li
,
Yanmin Si
,
Yan Lu
,
Pengyu Li
,
Cheng Jin
,
Zhipeng Wang
,
Fang Wang
,
Shiying Miao
,
Bo Wen
,
Linfang Wang
,
Yanni Ma
,
Jia Yu
,
and
Wei Song
Genome Res.
January 2021
31
:
13
-
26
;
Published in Advance
December 16, 2020
,
doi:
10.1101/gr.264333.120
Abstract
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Corrigendum
:
Corrigendum: 3′ UTR lengthening as a novel mechanism in regulating cellular senescence
Meng Chen
,
Guoliang Lyu
,
Miao Han
,
Hongbo Nie
,
Ting Shen
,
Wei Chen
,
Yichi Niu
,
Yifan Song
,
Xueping Li
,
Huan Li
,
Xinyu Chen
,
Ziyue Wang
,
Zheng Xia
,
Wei Li
,
Xiao-Li Tian
,
Chen Ding
,
Jun Gu
,
Yufang Zheng
,
Xinhua Liu
,
Jinfeng Hu
,
Gang Wei
,
Wei Tao
,
and
Ting Ni
Genome Res.
September 2020
30
:
1376-1
;
doi:
10.1101/gr.270165.120
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Method
:
Copolymerization of single-cell nucleic acids into balls of acrylamide gel
Siran Li
,
Jude Kendall
,
Sarah Park
,
Zihua Wang
,
Joan Alexander
,
Andrea Moffitt
,
Nissim Ranade
,
Cassidy Danyko
,
Bruno Gegenhuber
,
Stephan Fischer
,
Brian D. Robinson
,
Herbert Lepor
,
Jessica Tollkuhn
,
Jesse Gillis
,
Eric Brouzes
,
Alex Krasnitz
,
Dan Levy
,
and
Michael Wigler
Genome Res.
January 2020
30
:
49
-
61
;
Published in Advance
November 14, 2019
,
doi:
10.1101/gr.253047.119
Abstract
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Method
:
Single-pollen-cell sequencing for gamete-based phased diploid genome assembly in plants
Dongqing Shi
,
Jun Wu
,
Haibao Tang
,
Hao Yin
,
Hongtao Wang
,
Ran Wang
,
Runze Wang
,
Ming Qian
,
Juyou Wu
,
Kaijie Qi
,
Zhihua Xie
,
Zhiwen Wang
,
Xiang Zhao
,
and
Shaoling Zhang
Genome Res.
November 2019
29
:
1889
-
1899
;
Published in Advance
October 24, 2019
,
doi:
10.1101/gr.251033.119
Abstract
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Single-cell gene signature scoring
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