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Yun Zhang
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Method
:
A machine learning method for the discovery of minimum marker gene combinations for cell type identification from single-cell RNA sequencing
Brian Aevermann
,
Yun Zhang
,
Mark Novotny
,
Mohamed Keshk
,
Trygve Bakken
,
Jeremy Miller
,
Rebecca Hodge
,
Boudewijn Lelieveldt
,
Ed Lein
,
and
Richard H. Scheuermann
Genome Res.
October 2021
31
:
1767
-
1780
;
Published in Advance
June 4, 2021
,
doi:
10.1101/gr.275569.121
Abstract
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Method
:
Rapid and accurate alignment of nucleotide conversion sequencing reads with HISAT-3N
Yun Zhang
,
Chanhee Park
,
Christopher Bennett
,
Micah Thornton
,
and
Daehwan Kim
Genome Res.
July 2021
31
:
1290
-
1295
;
Published in Advance
June 8, 2021
,
doi:
10.1101/gr.275193.120
Abstract
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Research
:
Global regulatory features of alternative splicing across tissues and within the nervous system of
C. elegans
Bina Koterniak
,
Pallavi P. Pilaka
,
Xicotencatl Gracida
,
Lisa-Marie Schneider
,
Iva Pritišanac
,
Yun Zhang
,
and
John A. Calarco
Genome Res.
December 2020
30
:
1766
-
1780
;
Published in Advance
October 30, 2020
,
doi:
10.1101/gr.267328.120
Abstract
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Resource
:
Systematic genome editing of the genes on zebrafish Chromosome 1 by CRISPR/Cas9
Yonghua Sun
,
Bo Zhang
,
Lingfei Luo
,
De-Li Shi
,
Han Wang
,
Zongbin Cui
,
Honghui Huang
,
Ying Cao
,
Xiaodong Shu
,
Wenqing Zhang
,
Jianfeng Zhou
,
Yun Li
,
Jiulin Du
,
Qingshun Zhao
,
Jun Chen
,
Hanbing Zhong
,
Tao P. Zhong
,
Li Li
,
Jing-Wei Xiong
,
Jinrong Peng
,
Wuhan Xiao
,
Jian Zhang
,
Jihua Yao
,
Zhan Yin
,
Xianming Mo
,
Gang Peng
,
Jun Zhu
,
Yan Chen
,
Yong Zhou
,
Dong Liu
,
Weijun Pan
,
Yiyue Zhang
,
Hua Ruan
,
Feng Liu
,
Zuoyan Zhu
,
Anming Meng
,
and
The ZAKOC Consortium
Genome Res.
January 2020
30
:
118
-
126
;
Published in Advance
December 12, 2019
,
doi:
10.1101/gr.248559.119
Abstract
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RESEARCH
:
Genome Scan and Congenic Strains for Blood Pressure QTL Using Dahl Salt-Sensitive Rats
Michael R. Garrett
,
Howard Dene
,
Roxanne Walder
,
Qian-Yun Zhang
,
George T. Cicila
,
Shahin Assadnia
,
Alan Y. Deng
,
and
John P. Rapp
Genome Res.
July 1, 1998
8
:
711
-
723
;
doi:
10.1101/gr.8.7.711
Abstract
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Single-cell gene signature scoring
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